Gene : Glyma.17G118500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22595//PTHR22595:SF47 - CHITINASE-RELATED Genomic Order:  1185
Name:  ? Glyma.17G118500 Secondary Identifier:  ? PAC:30480772
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G118500 0.5kb upstream 0.5kb upstream 1628   true Chr17: 9376920-9378547 Glycine max
Glyma.17G118500 0.5kb upstream 0.5kb upstream 500   false Chr17: 9378048-9378547 Glycine max
Glyma.17G118500 0.5kb downstream 0.5kb downstream 1628   true Chr17: 9376420-9378047 Glycine max
Glyma.17G118500 0.5kb downstream 0.5kb downstream 500   false Chr17: 9376420-9376919 Glycine max
Glyma.17G118500 1.0kb upstream 1.0kb upstream 2128   true Chr17: 9376920-9379047 Glycine max
Glyma.17G118500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9378048-9379047 Glycine max
Glyma.17G118500 1.0kb downstream 1.0kb downstream 2128   true Chr17: 9375920-9378047 Glycine max
Glyma.17G118500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9375920-9376919 Glycine max
Glyma.17G118500 2.0kb upstream 2.0kb upstream 3128   true Chr17: 9376920-9380047 Glycine max
Glyma.17G118500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9378048-9380047 Glycine max
Glyma.17G118500 2.0kb downstream 2.0kb downstream 3128   true Chr17: 9374920-9378047 Glycine max
Glyma.17G118500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9374920-9376919 Glycine max
Glyma.17G118500 5.0kb upstream 5.0kb upstream 6128   true Chr17: 9376920-9383047 Glycine max
Glyma.17G118500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9378048-9383047 Glycine max
Glyma.17G118500 5.0kb downstream 5.0kb downstream 6128   true Chr17: 9371920-9378047 Glycine max
Glyma.17G118500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9371920-9376919 Glycine max
Glyma.17G118500 10.0kb upstream 10.0kb upstream 11128   true Chr17: 9376920-9388047 Glycine max
Glyma.17G118500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9378048-9388047 Glycine max
Glyma.17G118500 10.0kb downstream 10.0kb downstream 11128   true Chr17: 9366920-9378047 Glycine max
Glyma.17G118500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9366920-9376919 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303828 5265 Fabidae View MSA
124070009 5270 Rosid View MSA
123742328 5271 Pentapetalae View MSA
122795225 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.7855 0.0 93.0857 High High
cufflinks 6.91353 0.0 21.6978    
cufflinks 12.1029 0.0 35.1904    
cufflinks 11.8963 0.0 34.6402    
cufflinks 2.34769 0.0 8.31525    
cufflinks 12.6406 0.0 36.4012    
cufflinks 0.575989 0.0 2.20327   Low
cufflinks 27.1075 0.0 73.2233 High High
cufflinks 2.17311 0.0 7.74082    
cufflinks 15.995     High High
cufflinks 1.237        
cufflinks 6.272        
cufflinks 1.478        
cufflinks 0.059     Low Low
cufflinks 0.117       Low
cufflinks 7.29     High  
cufflinks 5.96        
cufflinks 5.687        
cufflinks 4.656        
cufflinks 7.888     High  
cufflinks 0.916        
cufflinks 8.702     High  
cufflinks 12.694     High High
cufflinks 0.727        
cufflinks 7.464     High  
cufflinks 1.255        

0 Strain