Gene : Glyma.17G119400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22891//PTHR22891:SF25 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Genomic Order:  1194
Name:  ? Glyma.17G119400 Secondary Identifier:  ? PAC:30480038
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G119400 0.5kb upstream 0.5kb upstream 18607   true Chr17: 9422086-9440692 Glycine max
Glyma.17G119400 0.5kb upstream 0.5kb upstream 500   false Chr17: 9440193-9440692 Glycine max
Glyma.17G119400 0.5kb downstream 0.5kb downstream 18607   true Chr17: 9421586-9440192 Glycine max
Glyma.17G119400 0.5kb downstream 0.5kb downstream 500   false Chr17: 9421586-9422085 Glycine max
Glyma.17G119400 1.0kb upstream 1.0kb upstream 19107   true Chr17: 9422086-9441192 Glycine max
Glyma.17G119400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9440193-9441192 Glycine max
Glyma.17G119400 1.0kb downstream 1.0kb downstream 19107   true Chr17: 9421086-9440192 Glycine max
Glyma.17G119400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9421086-9422085 Glycine max
Glyma.17G119400 2.0kb upstream 2.0kb upstream 20107   true Chr17: 9422086-9442192 Glycine max
Glyma.17G119400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9440193-9442192 Glycine max
Glyma.17G119400 2.0kb downstream 2.0kb downstream 20107   true Chr17: 9420086-9440192 Glycine max
Glyma.17G119400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9420086-9422085 Glycine max
Glyma.17G119400 5.0kb upstream 5.0kb upstream 23107   true Chr17: 9422086-9445192 Glycine max
Glyma.17G119400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9440193-9445192 Glycine max
Glyma.17G119400 5.0kb downstream 5.0kb downstream 23107   true Chr17: 9417086-9440192 Glycine max
Glyma.17G119400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9417086-9422085 Glycine max
Glyma.17G119400 10.0kb upstream 10.0kb upstream 28107   true Chr17: 9422086-9450192 Glycine max
Glyma.17G119400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9440193-9450192 Glycine max
Glyma.17G119400 10.0kb downstream 10.0kb downstream 28107   true Chr17: 9412086-9440192 Glycine max
Glyma.17G119400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9412086-9422085 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791835 5273 Angiosperm View MSA
122253770 5265 Fabidae View MSA
124070971 5270 Rosid View MSA
123742845 5271 Pentapetalae View MSA
122794533 5272 Eudicot View MSA
121352100 5274 Embryophyte View MSA
123382541 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.81337 0.0 4.83689    
cufflinks 37.0924 0.0 223.345 High High
cufflinks 1.84586 0.0 10.8466    
cufflinks 5.58766 0.0 24.1712    
cufflinks 0.793554 0.0 5.10805    
cufflinks 0.344109 0.0 2.01827   Low
cufflinks 2.06066 0.0 11.2055    
cufflinks 32.9359 0.0 204.873 High High
cufflinks 1.01672 0.0 5.70395    
cufflinks 4.559       High
cufflinks 0.004     Low Low
cufflinks 0.374        
cufflinks 0.024     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.406        
cufflinks 0.111        
cufflinks 0.608        
cufflinks 2.174       High
cufflinks 0.267        
cufflinks 0.006     Low Low
cufflinks 0.333        
cufflinks 0.43        
cufflinks 0.001     Low Low
cufflinks 0.41        
cufflinks 0.01     Low  

0 Strain