Gene : Glyma.17G165100 G. max Wm82.a2.v1
Defline:  (1 of 17) PF07899 - Frigida-like protein (Frigida) Genomic Order:  1651
Name:  ? Glyma.17G165100 Secondary Identifier:  ? PAC:30479884
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G165100 0.5kb upstream 0.5kb upstream 4142   true Chr17: 14876473-14880614 Glycine max
Glyma.17G165100 0.5kb upstream 0.5kb upstream 500   false Chr17: 14880115-14880614 Glycine max
Glyma.17G165100 0.5kb downstream 0.5kb downstream 4142   true Chr17: 14875973-14880114 Glycine max
Glyma.17G165100 0.5kb downstream 0.5kb downstream 500   false Chr17: 14875973-14876472 Glycine max
Glyma.17G165100 1.0kb upstream 1.0kb upstream 4642   true Chr17: 14876473-14881114 Glycine max
Glyma.17G165100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 14880115-14881114 Glycine max
Glyma.17G165100 1.0kb downstream 1.0kb downstream 4642   true Chr17: 14875473-14880114 Glycine max
Glyma.17G165100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 14875473-14876472 Glycine max
Glyma.17G165100 2.0kb upstream 2.0kb upstream 5642   true Chr17: 14876473-14882114 Glycine max
Glyma.17G165100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 14880115-14882114 Glycine max
Glyma.17G165100 2.0kb downstream 2.0kb downstream 5642   true Chr17: 14874473-14880114 Glycine max
Glyma.17G165100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 14874473-14876472 Glycine max
Glyma.17G165100 5.0kb upstream 5.0kb upstream 8642   true Chr17: 14876473-14885114 Glycine max
Glyma.17G165100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 14880115-14885114 Glycine max
Glyma.17G165100 5.0kb downstream 5.0kb downstream 8642   true Chr17: 14871473-14880114 Glycine max
Glyma.17G165100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 14871473-14876472 Glycine max
Glyma.17G165100 10.0kb upstream 10.0kb upstream 13642   true Chr17: 14876473-14890114 Glycine max
Glyma.17G165100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 14880115-14890114 Glycine max
Glyma.17G165100 10.0kb downstream 10.0kb downstream 13642   true Chr17: 14866473-14880114 Glycine max
Glyma.17G165100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 14866473-14876472 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302805 5265 Fabidae View MSA
124069809 5270 Rosid View MSA
123742657 5271 Pentapetalae View MSA
122794403 5272 Eudicot View MSA
122049415 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48912 0.0 10.1736    
cufflinks 3.70301 0.0 10.7025   High
cufflinks 3.24144 0.0 9.50362    
cufflinks 2.57567 0.0 7.79852    
cufflinks 2.65931 0.0 8.03343    
cufflinks 3.64766 0.0 10.5621   High
cufflinks 2.75946 0.0 8.31321    
cufflinks 2.5347 0.0 7.6938   Low
cufflinks 2.55444 0.0 7.75505    
cufflinks 1.642       Low
cufflinks 2.226        
cufflinks 2.014        
cufflinks 2.723        
cufflinks 2.633        
cufflinks 1.25       Low
cufflinks 3.575       High
cufflinks 1.667       Low
cufflinks 1.839        
cufflinks 3.519        
cufflinks 3.55       High
cufflinks 1.849        
cufflinks 3.897       High
cufflinks 4.274       High
cufflinks 2.724        
cufflinks 3.24        
cufflinks 2.076        

0 Strain