Gene : Glyma.17G165000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13683//PTHR13683:SF342 - ASPARTYL PROTEASES Genomic Order:  1650
Name:  ? Glyma.17G165000 Secondary Identifier:  ? PAC:30480719
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G165000 0.5kb upstream 0.5kb upstream 7015   true Chr17: 14867037-14874051 Glycine max
Glyma.17G165000 0.5kb upstream 0.5kb upstream 500   false Chr17: 14873552-14874051 Glycine max
Glyma.17G165000 0.5kb downstream 0.5kb downstream 7015   true Chr17: 14866537-14873551 Glycine max
Glyma.17G165000 0.5kb downstream 0.5kb downstream 500   false Chr17: 14866537-14867036 Glycine max
Glyma.17G165000 1.0kb upstream 1.0kb upstream 7515   true Chr17: 14867037-14874551 Glycine max
Glyma.17G165000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 14873552-14874551 Glycine max
Glyma.17G165000 1.0kb downstream 1.0kb downstream 7515   true Chr17: 14866037-14873551 Glycine max
Glyma.17G165000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 14866037-14867036 Glycine max
Glyma.17G165000 2.0kb upstream 2.0kb upstream 8515   true Chr17: 14867037-14875551 Glycine max
Glyma.17G165000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 14873552-14875551 Glycine max
Glyma.17G165000 2.0kb downstream 2.0kb downstream 8515   true Chr17: 14865037-14873551 Glycine max
Glyma.17G165000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 14865037-14867036 Glycine max
Glyma.17G165000 5.0kb upstream 5.0kb upstream 11515   true Chr17: 14867037-14878551 Glycine max
Glyma.17G165000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 14873552-14878551 Glycine max
Glyma.17G165000 5.0kb downstream 5.0kb downstream 11515   true Chr17: 14862037-14873551 Glycine max
Glyma.17G165000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 14862037-14867036 Glycine max
Glyma.17G165000 10.0kb upstream 10.0kb upstream 16515   true Chr17: 14867037-14883551 Glycine max
Glyma.17G165000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 14873552-14883551 Glycine max
Glyma.17G165000 10.0kb downstream 10.0kb downstream 16515   true Chr17: 14857037-14873551 Glycine max
Glyma.17G165000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 14857037-14867036 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308418 5265 Fabidae View MSA
124072520 5270 Rosid View MSA
123741714 5271 Pentapetalae View MSA
122786782 5272 Eudicot View MSA
122041856 5273 Angiosperm View MSA
121346441 5274 Embryophyte View MSA
123428674 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.9098 0.0 16.6672    
cufflinks 4.12695 0.0 14.9088   Low
cufflinks 7.31778 0.0 25.8936    
cufflinks 7.71883 0.0 27.1415    
cufflinks 6.52608 0.0 23.5293    
cufflinks 7.34763 0.0 25.9805    
cufflinks 3.6273 0.0 12.9499   Low
cufflinks 10.1076 0.0 34.6416   High
cufflinks 4.47571 0.0 14.9873    
cufflinks 1.651       High
cufflinks 0.871        
cufflinks 1.003        
cufflinks 1.176        
cufflinks 1.612       High
cufflinks 0.859        
cufflinks 0.966        
cufflinks 0.725       Low
cufflinks 1.255        
cufflinks 1.14        
cufflinks 0.713       Low
cufflinks 0.969        
cufflinks 0.867        
cufflinks 1.041        
cufflinks 0.988        
cufflinks 0.851        
cufflinks 0.941        

0 Strain