Gene : Glyma.17G166800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  1668
Name:  ? Glyma.17G166800 Secondary Identifier:  ? PAC:30481425
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G166800 0.5kb upstream 0.5kb upstream 14910   true Chr17: 15236821-15251730 Glycine max
Glyma.17G166800 0.5kb upstream 0.5kb upstream 500   false Chr17: 15236821-15237320 Glycine max
Glyma.17G166800 0.5kb downstream 0.5kb downstream 14910   true Chr17: 15237321-15252230 Glycine max
Glyma.17G166800 0.5kb downstream 0.5kb downstream 500   false Chr17: 15251731-15252230 Glycine max
Glyma.17G166800 1.0kb upstream 1.0kb upstream 15410   true Chr17: 15236321-15251730 Glycine max
Glyma.17G166800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 15236321-15237320 Glycine max
Glyma.17G166800 1.0kb downstream 1.0kb downstream 15410   true Chr17: 15237321-15252730 Glycine max
Glyma.17G166800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 15251731-15252730 Glycine max
Glyma.17G166800 2.0kb upstream 2.0kb upstream 16410   true Chr17: 15235321-15251730 Glycine max
Glyma.17G166800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 15235321-15237320 Glycine max
Glyma.17G166800 2.0kb downstream 2.0kb downstream 16410   true Chr17: 15237321-15253730 Glycine max
Glyma.17G166800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 15251731-15253730 Glycine max
Glyma.17G166800 5.0kb upstream 5.0kb upstream 19410   true Chr17: 15232321-15251730 Glycine max
Glyma.17G166800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 15232321-15237320 Glycine max
Glyma.17G166800 5.0kb downstream 5.0kb downstream 19410   true Chr17: 15237321-15256730 Glycine max
Glyma.17G166800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 15251731-15256730 Glycine max
Glyma.17G166800 10.0kb upstream 10.0kb upstream 24410   true Chr17: 15227321-15251730 Glycine max
Glyma.17G166800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 15227321-15237320 Glycine max
Glyma.17G166800 10.0kb downstream 10.0kb downstream 24410   true Chr17: 15237321-15261730 Glycine max
Glyma.17G166800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 15251731-15261730 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300433 5265 Fabidae View MSA
124064324 5270 Rosid View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9028 0.0 37.1321   High
cufflinks 11.0433 0.0 29.4722   High
cufflinks 6.93629 0.0 18.7654    
cufflinks 8.22392 0.0 22.0998    
cufflinks 5.81529 0.0 15.9227    
cufflinks 4.39382 0.0 12.319   Low
cufflinks 4.17172 0.0 11.7652   Low
cufflinks 7.12926 0.0 19.2642    
cufflinks 5.08744 0.0 14.0657    
cufflinks 0.936        
cufflinks 0.203       Low
cufflinks 1.556        
cufflinks 0.644        
cufflinks 0.494        
cufflinks 0.517        
cufflinks 1.441        
cufflinks 0.72        
cufflinks 1.688        
cufflinks 2.029        
cufflinks 1.938        
cufflinks 0.151       Low
cufflinks 2.088       High
cufflinks 1.733        
cufflinks 0.143       Low
cufflinks 1.673        
cufflinks 0.932        

0 Strain