Gene : Glyma.17G167200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13847:SF150 - OXIDOREDUCTASE TDA3-RELATED Genomic Order:  1672
Name:  ? Glyma.17G167200 Secondary Identifier:  ? PAC:30479433
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G167200 0.5kb upstream 0.5kb upstream 2755   true Chr17: 15368037-15370791 Glycine max
Glyma.17G167200 0.5kb upstream 0.5kb upstream 500   false Chr17: 15368037-15368536 Glycine max
Glyma.17G167200 0.5kb downstream 0.5kb downstream 2755   true Chr17: 15368537-15371291 Glycine max
Glyma.17G167200 0.5kb downstream 0.5kb downstream 500   false Chr17: 15370792-15371291 Glycine max
Glyma.17G167200 1.0kb upstream 1.0kb upstream 3255   true Chr17: 15367537-15370791 Glycine max
Glyma.17G167200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 15367537-15368536 Glycine max
Glyma.17G167200 1.0kb downstream 1.0kb downstream 3255   true Chr17: 15368537-15371791 Glycine max
Glyma.17G167200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 15370792-15371791 Glycine max
Glyma.17G167200 2.0kb upstream 2.0kb upstream 4255   true Chr17: 15366537-15370791 Glycine max
Glyma.17G167200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 15366537-15368536 Glycine max
Glyma.17G167200 2.0kb downstream 2.0kb downstream 4255   true Chr17: 15368537-15372791 Glycine max
Glyma.17G167200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 15370792-15372791 Glycine max
Glyma.17G167200 5.0kb upstream 5.0kb upstream 7255   true Chr17: 15363537-15370791 Glycine max
Glyma.17G167200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 15363537-15368536 Glycine max
Glyma.17G167200 5.0kb downstream 5.0kb downstream 7255   true Chr17: 15368537-15375791 Glycine max
Glyma.17G167200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 15370792-15375791 Glycine max
Glyma.17G167200 10.0kb upstream 10.0kb upstream 12255   true Chr17: 15358537-15370791 Glycine max
Glyma.17G167200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 15358537-15368536 Glycine max
Glyma.17G167200 10.0kb downstream 10.0kb downstream 12255   true Chr17: 15368537-15380791 Glycine max
Glyma.17G167200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 15370792-15380791 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306183 5265 Fabidae View MSA
124065372 5270 Rosid View MSA
123753619 5271 Pentapetalae View MSA
122787005 5272 Eudicot View MSA
122045969 5273 Angiosperm View MSA
121345060 5274 Embryophyte View MSA
123424599 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5541 0.0 46.8397   High
cufflinks 8.61448 0.0 23.5287   Low
cufflinks 15.1318 0.0 40.3985    
cufflinks 16.4549 0.0 43.9015    
cufflinks 10.3913 0.0 28.0012    
cufflinks 7.63736 0.0 20.9882   Low
cufflinks 20.0635 0.0 53.6284   High
cufflinks 9.79685 0.0 26.5414    
cufflinks 10.6164 0.0 28.6102    
cufflinks 3.552       Low
cufflinks 13.042     High High
cufflinks 13.953     High High
cufflinks 3.077       Low
cufflinks 3.146       Low
cufflinks 13.117     High High
cufflinks 7.447     High  
cufflinks 4.109       Low
cufflinks 8.593     High  
cufflinks 5.66        
cufflinks 10.076     High  
cufflinks 13.023     High High
cufflinks 9.703     High  
cufflinks 5.289        
cufflinks 11.218     High  
cufflinks 9.231     High  
cufflinks 6.592     High  

0 Strain