Gene : Glyma.17G169700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24067//PTHR24067:SF112 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  1697
Name:  ? Glyma.17G169700 Secondary Identifier:  ? PAC:30482022
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G169700 0.5kb upstream 0.5kb upstream 3744   true Chr17: 15823366-15827109 Glycine max
Glyma.17G169700 0.5kb upstream 0.5kb upstream 500   false Chr17: 15823366-15823865 Glycine max
Glyma.17G169700 0.5kb downstream 0.5kb downstream 3744   true Chr17: 15823866-15827609 Glycine max
Glyma.17G169700 0.5kb downstream 0.5kb downstream 500   false Chr17: 15827110-15827609 Glycine max
Glyma.17G169700 1.0kb upstream 1.0kb upstream 4244   true Chr17: 15822866-15827109 Glycine max
Glyma.17G169700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 15822866-15823865 Glycine max
Glyma.17G169700 1.0kb downstream 1.0kb downstream 4244   true Chr17: 15823866-15828109 Glycine max
Glyma.17G169700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 15827110-15828109 Glycine max
Glyma.17G169700 2.0kb upstream 2.0kb upstream 5244   true Chr17: 15821866-15827109 Glycine max
Glyma.17G169700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 15821866-15823865 Glycine max
Glyma.17G169700 2.0kb downstream 2.0kb downstream 5244   true Chr17: 15823866-15829109 Glycine max
Glyma.17G169700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 15827110-15829109 Glycine max
Glyma.17G169700 5.0kb upstream 5.0kb upstream 8244   true Chr17: 15818866-15827109 Glycine max
Glyma.17G169700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 15818866-15823865 Glycine max
Glyma.17G169700 5.0kb downstream 5.0kb downstream 8244   true Chr17: 15823866-15832109 Glycine max
Glyma.17G169700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 15827110-15832109 Glycine max
Glyma.17G169700 10.0kb upstream 10.0kb upstream 13244   true Chr17: 15813866-15827109 Glycine max
Glyma.17G169700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 15813866-15823865 Glycine max
Glyma.17G169700 10.0kb downstream 10.0kb downstream 13244   true Chr17: 15823866-15837109 Glycine max
Glyma.17G169700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 15827110-15837109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309460 5265 Fabidae View MSA
124074734 5270 Rosid View MSA
123752891 5271 Pentapetalae View MSA
122794655 5272 Eudicot View MSA
122047112 5273 Angiosperm View MSA
121344973 5274 Embryophyte View MSA
123425853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.1093 0.0 176.532 High  
cufflinks 34.7113 0.0 92.6519 High  
cufflinks 76.3947 0.0 209.174 High  
cufflinks 32.9944 0.0 88.1231 High Low
cufflinks 49.3156 0.0 132.187 High  
cufflinks 82.2 0.0 227.055 High High
cufflinks 23.5011 0.0 63.4013 High Low
cufflinks 72.4492 0.0 197.793 High  
cufflinks 64.1464 0.0 173.83 High  
cufflinks 13.311     High  
cufflinks 20.695     High High
cufflinks 13.282     High  
cufflinks 9.168     High Low
cufflinks 6.974     High Low
cufflinks 18.554     High High
cufflinks 10.94     High  
cufflinks 14.05     High  
cufflinks 9.582     High  
cufflinks 9.799     High  
cufflinks 10.113     High  
cufflinks 14.936     High  
cufflinks 10.642     High  
cufflinks 12.664     High  
cufflinks 19.267     High High
cufflinks 10.422     High  
cufflinks 14.44     High  

0 Strain