Gene : Glyma.17G170600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31580:SF3 - FILAMENT-LIKE PLANT PROTEIN 7 Genomic Order:  1706
Name:  ? Glyma.17G170600 Secondary Identifier:  ? PAC:30478554
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G170600 0.5kb upstream 0.5kb upstream 7177   true Chr17: 16067898-16075074 Glycine max
Glyma.17G170600 0.5kb upstream 0.5kb upstream 500   false Chr17: 16067898-16068397 Glycine max
Glyma.17G170600 0.5kb downstream 0.5kb downstream 7177   true Chr17: 16068398-16075574 Glycine max
Glyma.17G170600 0.5kb downstream 0.5kb downstream 500   false Chr17: 16075075-16075574 Glycine max
Glyma.17G170600 1.0kb upstream 1.0kb upstream 7677   true Chr17: 16067398-16075074 Glycine max
Glyma.17G170600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 16067398-16068397 Glycine max
Glyma.17G170600 1.0kb downstream 1.0kb downstream 7677   true Chr17: 16068398-16076074 Glycine max
Glyma.17G170600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 16075075-16076074 Glycine max
Glyma.17G170600 2.0kb upstream 2.0kb upstream 8677   true Chr17: 16066398-16075074 Glycine max
Glyma.17G170600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 16066398-16068397 Glycine max
Glyma.17G170600 2.0kb downstream 2.0kb downstream 8677   true Chr17: 16068398-16077074 Glycine max
Glyma.17G170600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 16075075-16077074 Glycine max
Glyma.17G170600 5.0kb upstream 5.0kb upstream 11677   true Chr17: 16063398-16075074 Glycine max
Glyma.17G170600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 16063398-16068397 Glycine max
Glyma.17G170600 5.0kb downstream 5.0kb downstream 11677   true Chr17: 16068398-16080074 Glycine max
Glyma.17G170600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 16075075-16080074 Glycine max
Glyma.17G170600 10.0kb upstream 10.0kb upstream 16677   true Chr17: 16058398-16075074 Glycine max
Glyma.17G170600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 16058398-16068397 Glycine max
Glyma.17G170600 10.0kb downstream 10.0kb downstream 16677   true Chr17: 16068398-16085074 Glycine max
Glyma.17G170600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 16075075-16085074 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308504 5265 Fabidae View MSA
124061123 5270 Rosid View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.88395 0.0 9.2826   Low
cufflinks 10.4521 0.0 38.6982   High
cufflinks 2.73356 0.0 9.22239   Low
cufflinks 4.7169 0.0 16.5597    
cufflinks 6.2028 0.0 21.7075    
cufflinks 3.49698 0.0 12.8435    
cufflinks 9.02357 0.0 31.8683    
cufflinks 10.7902 0.0 38.7467   High
cufflinks 4.22104 0.0 12.8407    
cufflinks 3.742       High
cufflinks 0.235       Low
cufflinks 1.458        
cufflinks 3.484       High
cufflinks 2.452        
cufflinks 0.04     Low Low
cufflinks 1.27        
cufflinks 1.068        
cufflinks 2.504        
cufflinks 3.227       High
cufflinks 0.946        
cufflinks 0.317        
cufflinks 1.387        
cufflinks 1.36        
cufflinks 0.161       Low
cufflinks 1.31        
cufflinks 0.613        

0 Strain