Gene : Glyma.17G158100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  1581
Name:  ? Glyma.17G158100 Secondary Identifier:  ? PAC:30479508
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G158100 0.5kb upstream 0.5kb upstream 2610   true Chr17: 13554133-13556742 Glycine max
Glyma.17G158100 0.5kb upstream 0.5kb upstream 500   false Chr17: 13556243-13556742 Glycine max
Glyma.17G158100 0.5kb downstream 0.5kb downstream 2610   true Chr17: 13553633-13556242 Glycine max
Glyma.17G158100 0.5kb downstream 0.5kb downstream 500   false Chr17: 13553633-13554132 Glycine max
Glyma.17G158100 1.0kb upstream 1.0kb upstream 3110   true Chr17: 13554133-13557242 Glycine max
Glyma.17G158100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13556243-13557242 Glycine max
Glyma.17G158100 1.0kb downstream 1.0kb downstream 3110   true Chr17: 13553133-13556242 Glycine max
Glyma.17G158100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13553133-13554132 Glycine max
Glyma.17G158100 2.0kb upstream 2.0kb upstream 4110   true Chr17: 13554133-13558242 Glycine max
Glyma.17G158100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13556243-13558242 Glycine max
Glyma.17G158100 2.0kb downstream 2.0kb downstream 4110   true Chr17: 13552133-13556242 Glycine max
Glyma.17G158100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13552133-13554132 Glycine max
Glyma.17G158100 5.0kb upstream 5.0kb upstream 7110   true Chr17: 13554133-13561242 Glycine max
Glyma.17G158100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13556243-13561242 Glycine max
Glyma.17G158100 5.0kb downstream 5.0kb downstream 7110   true Chr17: 13549133-13556242 Glycine max
Glyma.17G158100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13549133-13554132 Glycine max
Glyma.17G158100 10.0kb upstream 10.0kb upstream 12110   true Chr17: 13554133-13566242 Glycine max
Glyma.17G158100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13556243-13566242 Glycine max
Glyma.17G158100 10.0kb downstream 10.0kb downstream 12110   true Chr17: 13544133-13556242 Glycine max
Glyma.17G158100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13544133-13554132 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313200 5265 Fabidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.282841 0.0 1.06965    
cufflinks 0.0337257 0.0 0.139854 Low Low
cufflinks 0.128386 0.0 0.503188 Low  
cufflinks 1.07481 0.0 3.75773    
cufflinks 1.82699 0.0 5.99463    
cufflinks 13.8807 0.0 37.0935   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.168726 0.0 0.652821 Low  
cufflinks 1.08195 0.0 3.77481    
cufflinks 0.233        
cufflinks 0.481        
cufflinks 0.22        
cufflinks 8.91     High High
cufflinks 2.122       High
cufflinks 0.512        
cufflinks 0.041     Low  
cufflinks 1.943       High
cufflinks 0.005     Low Low
cufflinks 0.012     Low Low
cufflinks 0.034     Low  
cufflinks 1.256        
cufflinks 0.057     Low  
cufflinks 0.024     Low Low
cufflinks 0.356        
cufflinks 0.183        
cufflinks 1.552        

0 Strain