Gene : Glyma.17G158300 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1583
Name:  ? Glyma.17G158300 Secondary Identifier:  ? PAC:30478609
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G158300 0.5kb upstream 0.5kb upstream 5080   true Chr17: 13595433-13600512 Glycine max
Glyma.17G158300 0.5kb upstream 0.5kb upstream 500   false Chr17: 13600013-13600512 Glycine max
Glyma.17G158300 0.5kb downstream 0.5kb downstream 5080   true Chr17: 13594933-13600012 Glycine max
Glyma.17G158300 0.5kb downstream 0.5kb downstream 500   false Chr17: 13594933-13595432 Glycine max
Glyma.17G158300 1.0kb upstream 1.0kb upstream 5580   true Chr17: 13595433-13601012 Glycine max
Glyma.17G158300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13600013-13601012 Glycine max
Glyma.17G158300 1.0kb downstream 1.0kb downstream 5580   true Chr17: 13594433-13600012 Glycine max
Glyma.17G158300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13594433-13595432 Glycine max
Glyma.17G158300 2.0kb upstream 2.0kb upstream 6580   true Chr17: 13595433-13602012 Glycine max
Glyma.17G158300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13600013-13602012 Glycine max
Glyma.17G158300 2.0kb downstream 2.0kb downstream 6580   true Chr17: 13593433-13600012 Glycine max
Glyma.17G158300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13593433-13595432 Glycine max
Glyma.17G158300 5.0kb upstream 5.0kb upstream 9580   true Chr17: 13595433-13605012 Glycine max
Glyma.17G158300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13600013-13605012 Glycine max
Glyma.17G158300 5.0kb downstream 5.0kb downstream 9580   true Chr17: 13590433-13600012 Glycine max
Glyma.17G158300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13590433-13595432 Glycine max
Glyma.17G158300 10.0kb upstream 10.0kb upstream 14580   true Chr17: 13595433-13610012 Glycine max
Glyma.17G158300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13600013-13610012 Glycine max
Glyma.17G158300 10.0kb downstream 10.0kb downstream 14580   true Chr17: 13585433-13600012 Glycine max
Glyma.17G158300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13585433-13595432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308902 5265 Fabidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0855294 0.0 0.334204 Low Low
cufflinks 14.3091 0.0 54.8866   High
cufflinks 1.32177 0.0 5.92016    
cufflinks 3.93759 0.0 16.748    
cufflinks 0.973003 0.0 3.67842    
cufflinks 0.736287 0.0 2.98581    
cufflinks 7.54969 0.0 29.0695    
cufflinks 6.23164 0.0 24.283    
cufflinks 1.49682 0.0 6.51879    
cufflinks 0.786        
cufflinks 0.194        
cufflinks 0.679        
cufflinks 0.116       Low
cufflinks 0.02     Low Low
cufflinks 0.302        
cufflinks 0.531        
cufflinks 0.175        
cufflinks 0.81        
cufflinks 2.727       High
cufflinks 0.235        
cufflinks 0.541        
cufflinks 0.416        
cufflinks 1.232       High
cufflinks 0.248        
cufflinks 0.337        
cufflinks 0.252        

0 Strain