Gene : Glyma.17G160700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  1607
Name:  ? Glyma.17G160700 Secondary Identifier:  ? PAC:30481366
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G160700 0.5kb upstream 0.5kb upstream 5247   true Chr17: 13965579-13970825 Glycine max
Glyma.17G160700 0.5kb upstream 0.5kb upstream 500   false Chr17: 13965579-13966078 Glycine max
Glyma.17G160700 0.5kb downstream 0.5kb downstream 5247   true Chr17: 13966079-13971325 Glycine max
Glyma.17G160700 0.5kb downstream 0.5kb downstream 500   false Chr17: 13970826-13971325 Glycine max
Glyma.17G160700 1.0kb upstream 1.0kb upstream 5747   true Chr17: 13965079-13970825 Glycine max
Glyma.17G160700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13965079-13966078 Glycine max
Glyma.17G160700 1.0kb downstream 1.0kb downstream 5747   true Chr17: 13966079-13971825 Glycine max
Glyma.17G160700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13970826-13971825 Glycine max
Glyma.17G160700 2.0kb upstream 2.0kb upstream 6747   true Chr17: 13964079-13970825 Glycine max
Glyma.17G160700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13964079-13966078 Glycine max
Glyma.17G160700 2.0kb downstream 2.0kb downstream 6747   true Chr17: 13966079-13972825 Glycine max
Glyma.17G160700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13970826-13972825 Glycine max
Glyma.17G160700 5.0kb upstream 5.0kb upstream 9747   true Chr17: 13961079-13970825 Glycine max
Glyma.17G160700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13961079-13966078 Glycine max
Glyma.17G160700 5.0kb downstream 5.0kb downstream 9747   true Chr17: 13966079-13975825 Glycine max
Glyma.17G160700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13970826-13975825 Glycine max
Glyma.17G160700 10.0kb upstream 10.0kb upstream 14747   true Chr17: 13956079-13970825 Glycine max
Glyma.17G160700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13956079-13966078 Glycine max
Glyma.17G160700 10.0kb downstream 10.0kb downstream 14747   true Chr17: 13966079-13980825 Glycine max
Glyma.17G160700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13970826-13980825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
122254735 5265 Fabidae View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29382 0.0 15.3378   Low
cufflinks 4.78617 0.0 22.0484    
cufflinks 1.50738 0.0 11.3206   Low
cufflinks 9.47076 0.0 43.1989    
cufflinks 9.0216 0.0 35.7382    
cufflinks 14.6343 0.0 65.9883    
cufflinks 12.9493 0.0 57.1719    
cufflinks 10.4568 0.0 43.9945    
cufflinks 10.7455 0.0 52.2172    
cufflinks 0.631       High
cufflinks 0.083       Low
cufflinks 0.204        
cufflinks 1.065       High
cufflinks 0.806       High
cufflinks 0.113       Low
cufflinks 0.259        
cufflinks 0.177        
cufflinks 0.371        
cufflinks 0.336        
cufflinks 0.2        
cufflinks 0.193        
cufflinks 0.224        
cufflinks 0.194        
cufflinks 0.161        
cufflinks 0.235        
cufflinks 0.182        

0 Strain