Gene : Glyma.17G161500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32370:SF26 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY3-RELATED Genomic Order:  1615
Name:  ? Glyma.17G161500 Secondary Identifier:  ? PAC:30480874
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G161500 0.5kb upstream 0.5kb upstream 6465   true Chr17: 14072846-14079310 Glycine max
Glyma.17G161500 0.5kb upstream 0.5kb upstream 500   false Chr17: 14072846-14073345 Glycine max
Glyma.17G161500 0.5kb downstream 0.5kb downstream 6465   true Chr17: 14073346-14079810 Glycine max
Glyma.17G161500 0.5kb downstream 0.5kb downstream 500   false Chr17: 14079311-14079810 Glycine max
Glyma.17G161500 1.0kb upstream 1.0kb upstream 6965   true Chr17: 14072346-14079310 Glycine max
Glyma.17G161500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 14072346-14073345 Glycine max
Glyma.17G161500 1.0kb downstream 1.0kb downstream 6965   true Chr17: 14073346-14080310 Glycine max
Glyma.17G161500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 14079311-14080310 Glycine max
Glyma.17G161500 2.0kb upstream 2.0kb upstream 7965   true Chr17: 14071346-14079310 Glycine max
Glyma.17G161500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 14071346-14073345 Glycine max
Glyma.17G161500 2.0kb downstream 2.0kb downstream 7965   true Chr17: 14073346-14081310 Glycine max
Glyma.17G161500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 14079311-14081310 Glycine max
Glyma.17G161500 5.0kb upstream 5.0kb upstream 10965   true Chr17: 14068346-14079310 Glycine max
Glyma.17G161500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 14068346-14073345 Glycine max
Glyma.17G161500 5.0kb downstream 5.0kb downstream 10965   true Chr17: 14073346-14084310 Glycine max
Glyma.17G161500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 14079311-14084310 Glycine max
Glyma.17G161500 10.0kb upstream 10.0kb upstream 15965   true Chr17: 14063346-14079310 Glycine max
Glyma.17G161500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 14063346-14073345 Glycine max
Glyma.17G161500 10.0kb downstream 10.0kb downstream 15965   true Chr17: 14073346-14089310 Glycine max
Glyma.17G161500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 14079311-14089310 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300314 5265 Fabidae View MSA
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.70791 0.0 33.6748    
cufflinks 9.76455 0.0 38.39   High
cufflinks 2.36246 0.0 10.7795   Low
cufflinks 4.2191 0.0 19.2181    
cufflinks 10.294 0.0 41.2609   High
cufflinks 3.01166 0.0 12.7902    
cufflinks 3.16003 0.0 14.8524    
cufflinks 6.86826 0.0 27.3932    
cufflinks 3.1833 0.0 15.0793    
cufflinks 0.649        
cufflinks 0.027     Low Low
cufflinks 0.954        
cufflinks 1.54        
cufflinks 2.527       High
cufflinks 0.019     Low Low
cufflinks 0.616        
cufflinks 0.047     Low Low
cufflinks 1.185        
cufflinks 2.158       High
cufflinks 0.859        
cufflinks 0.037     Low Low
cufflinks 0.792        
cufflinks 0.501        
cufflinks 0.032     Low Low
cufflinks 0.816        
cufflinks 0.088        

0 Strain