Gene : Glyma.17G163400 G. max Wm82.a2.v1
Genomic Order:  1634 Name:  ? Glyma.17G163400
Secondary Identifier:  ? PAC:30481130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G163400 0.5kb upstream 0.5kb upstream 1902   true Chr17: 14588228-14590129 Glycine max
Glyma.17G163400 0.5kb upstream 0.5kb upstream 500   false Chr17: 14588228-14588727 Glycine max
Glyma.17G163400 0.5kb downstream 0.5kb downstream 1902   true Chr17: 14588728-14590629 Glycine max
Glyma.17G163400 0.5kb downstream 0.5kb downstream 500   false Chr17: 14590130-14590629 Glycine max
Glyma.17G163400 1.0kb upstream 1.0kb upstream 2402   true Chr17: 14587728-14590129 Glycine max
Glyma.17G163400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 14587728-14588727 Glycine max
Glyma.17G163400 1.0kb downstream 1.0kb downstream 2402   true Chr17: 14588728-14591129 Glycine max
Glyma.17G163400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 14590130-14591129 Glycine max
Glyma.17G163400 2.0kb upstream 2.0kb upstream 3402   true Chr17: 14586728-14590129 Glycine max
Glyma.17G163400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 14586728-14588727 Glycine max
Glyma.17G163400 2.0kb downstream 2.0kb downstream 3402   true Chr17: 14588728-14592129 Glycine max
Glyma.17G163400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 14590130-14592129 Glycine max
Glyma.17G163400 5.0kb upstream 5.0kb upstream 6402   true Chr17: 14583728-14590129 Glycine max
Glyma.17G163400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 14583728-14588727 Glycine max
Glyma.17G163400 5.0kb downstream 5.0kb downstream 6402   true Chr17: 14588728-14595129 Glycine max
Glyma.17G163400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 14590130-14595129 Glycine max
Glyma.17G163400 10.0kb upstream 10.0kb upstream 11402   true Chr17: 14578728-14590129 Glycine max
Glyma.17G163400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 14578728-14588727 Glycine max
Glyma.17G163400 10.0kb downstream 10.0kb downstream 11402   true Chr17: 14588728-14600129 Glycine max
Glyma.17G163400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 14590130-14600129 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244137 5265 Fabidae Singleton cluster - no MSA
124070403 5270 Rosid View MSA
123745090 5271 Pentapetalae View MSA
122786349 5272 Eudicot View MSA
122049754 5273 Angiosperm View MSA
121311576 5274 Embryophyte View MSA
123348854 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.5225 0.0 13.8619    
cufflinks 14.9278 0.0 40.3153   High
cufflinks 1.85459 0.0 6.36165   Low
cufflinks 5.22106 0.0 15.6252    
cufflinks 8.06416 0.0 22.9276    
cufflinks 7.80033 0.0 22.2451    
cufflinks 1.01482 0.0 3.67253   Low
cufflinks 4.06258 0.0 12.58    
cufflinks 6.9316 0.0 20.0211    
cufflinks 3.687        
cufflinks 2.558       Low
cufflinks 5.796        
cufflinks 18.206     High High
cufflinks 15.781     High High
cufflinks 6.997     High  
cufflinks 4.894        
cufflinks 2.293       Low
cufflinks 7.29     High  
cufflinks 8.791     High  
cufflinks 4.106        
cufflinks 2.994        
cufflinks 6.236        
cufflinks 9.349     High  
cufflinks 1.172       Low
cufflinks 4.03        
cufflinks 8.043     High  

0 Strain