Gene : Glyma.17G152500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12050:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG Genomic Order:  1525
Name:  ? Glyma.17G152500 Secondary Identifier:  ? PAC:30479268
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G152500 0.5kb upstream 0.5kb upstream 1910   true Chr17: 12707834-12709743 Glycine max
Glyma.17G152500 0.5kb upstream 0.5kb upstream 500   false Chr17: 12709244-12709743 Glycine max
Glyma.17G152500 0.5kb downstream 0.5kb downstream 1910   true Chr17: 12707334-12709243 Glycine max
Glyma.17G152500 0.5kb downstream 0.5kb downstream 500   false Chr17: 12707334-12707833 Glycine max
Glyma.17G152500 1.0kb upstream 1.0kb upstream 2410   true Chr17: 12707834-12710243 Glycine max
Glyma.17G152500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 12709244-12710243 Glycine max
Glyma.17G152500 1.0kb downstream 1.0kb downstream 2410   true Chr17: 12706834-12709243 Glycine max
Glyma.17G152500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 12706834-12707833 Glycine max
Glyma.17G152500 2.0kb upstream 2.0kb upstream 3410   true Chr17: 12707834-12711243 Glycine max
Glyma.17G152500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 12709244-12711243 Glycine max
Glyma.17G152500 2.0kb downstream 2.0kb downstream 3410   true Chr17: 12705834-12709243 Glycine max
Glyma.17G152500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 12705834-12707833 Glycine max
Glyma.17G152500 5.0kb upstream 5.0kb upstream 6410   true Chr17: 12707834-12714243 Glycine max
Glyma.17G152500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 12709244-12714243 Glycine max
Glyma.17G152500 5.0kb downstream 5.0kb downstream 6410   true Chr17: 12702834-12709243 Glycine max
Glyma.17G152500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 12702834-12707833 Glycine max
Glyma.17G152500 10.0kb upstream 10.0kb upstream 11410   true Chr17: 12707834-12719243 Glycine max
Glyma.17G152500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 12709244-12719243 Glycine max
Glyma.17G152500 10.0kb downstream 10.0kb downstream 11410   true Chr17: 12697834-12709243 Glycine max
Glyma.17G152500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 12697834-12707833 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314503 5265 Fabidae View MSA
124063818 5270 Rosid View MSA
123749755 5271 Pentapetalae View MSA
122786869 5272 Eudicot View MSA
122046998 5273 Angiosperm View MSA
121348404 5274 Embryophyte View MSA
123428267 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.246279 0.0 0.983911    
cufflinks 0.134776 0.0 0.555035 Low  
cufflinks 0.248512 0.0 0.995275    
cufflinks 0.0767707 0.0 0.329003 Low Low
cufflinks 1.96788 0.0 7.21391   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.17747 0.0 4.42365    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.257        
cufflinks 0.068     Low  
cufflinks 0.566       High
cufflinks 0.186        
cufflinks 0.091        
cufflinks 0.013     Low Low
cufflinks 0.199        
cufflinks 0.037     Low  
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.194        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.08        
cufflinks 0.01     Low Low
cufflinks 0.296       High

0 Strain