Gene : Glyma.17G153300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11654:SF121 - PROTEIN NRT1/ PTR FAMILY 7.3 Genomic Order:  1533
Name:  ? Glyma.17G153300 Secondary Identifier:  ? PAC:30479562
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G153300 0.5kb upstream 0.5kb upstream 6474   true Chr17: 12841610-12848083 Glycine max
Glyma.17G153300 0.5kb upstream 0.5kb upstream 500   false Chr17: 12847584-12848083 Glycine max
Glyma.17G153300 0.5kb downstream 0.5kb downstream 6474   true Chr17: 12841110-12847583 Glycine max
Glyma.17G153300 0.5kb downstream 0.5kb downstream 500   false Chr17: 12841110-12841609 Glycine max
Glyma.17G153300 1.0kb upstream 1.0kb upstream 6974   true Chr17: 12841610-12848583 Glycine max
Glyma.17G153300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 12847584-12848583 Glycine max
Glyma.17G153300 1.0kb downstream 1.0kb downstream 6974   true Chr17: 12840610-12847583 Glycine max
Glyma.17G153300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 12840610-12841609 Glycine max
Glyma.17G153300 2.0kb upstream 2.0kb upstream 7974   true Chr17: 12841610-12849583 Glycine max
Glyma.17G153300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 12847584-12849583 Glycine max
Glyma.17G153300 2.0kb downstream 2.0kb downstream 7974   true Chr17: 12839610-12847583 Glycine max
Glyma.17G153300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 12839610-12841609 Glycine max
Glyma.17G153300 5.0kb upstream 5.0kb upstream 10974   true Chr17: 12841610-12852583 Glycine max
Glyma.17G153300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 12847584-12852583 Glycine max
Glyma.17G153300 5.0kb downstream 5.0kb downstream 10974   true Chr17: 12836610-12847583 Glycine max
Glyma.17G153300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 12836610-12841609 Glycine max
Glyma.17G153300 10.0kb upstream 10.0kb upstream 15974   true Chr17: 12841610-12857583 Glycine max
Glyma.17G153300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 12847584-12857583 Glycine max
Glyma.17G153300 10.0kb downstream 10.0kb downstream 15974   true Chr17: 12831610-12847583 Glycine max
Glyma.17G153300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 12831610-12841609 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311036 5265 Fabidae View MSA
124068315 5270 Rosid View MSA
123746803 5271 Pentapetalae View MSA
122794508 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.3637 0.0 14.8713    
cufflinks 0.109214 0.0 0.425453 Low Low
cufflinks 19.7466 0.0 53.3343   High
cufflinks 0.04691 0.0 0.188445 Low Low
cufflinks 8.1059 0.0 21.8688    
cufflinks 0.372875 0.0 1.37427    
cufflinks 1.37049 0.0 4.53259    
cufflinks 0.615952 0.0 2.19856    
cufflinks 7.29718 0.0 19.7705    
cufflinks 0.138        
cufflinks 0.113        
cufflinks 6.801       High
cufflinks 1.166        
cufflinks 2.125       High
cufflinks 0.051     Low  
cufflinks 0.016     Low Low
cufflinks 0.188        
cufflinks 2.145       High
cufflinks 0.017     Low Low
cufflinks 0.065     Low  
cufflinks 0.366        
cufflinks 0.055     Low  
cufflinks 0.17        
cufflinks 0.667        
cufflinks 0.11        
cufflinks 1.801       High

0 Strain