Gene : Glyma.17G153700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1537
Name:  ? Glyma.17G153700 Secondary Identifier:  ? PAC:30481653
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G153700 0.5kb upstream 0.5kb upstream 5053   true Chr17: 12890293-12895345 Glycine max
Glyma.17G153700 0.5kb upstream 0.5kb upstream 500   false Chr17: 12890293-12890792 Glycine max
Glyma.17G153700 0.5kb downstream 0.5kb downstream 5053   true Chr17: 12890793-12895845 Glycine max
Glyma.17G153700 0.5kb downstream 0.5kb downstream 500   false Chr17: 12895346-12895845 Glycine max
Glyma.17G153700 1.0kb upstream 1.0kb upstream 5553   true Chr17: 12889793-12895345 Glycine max
Glyma.17G153700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 12889793-12890792 Glycine max
Glyma.17G153700 1.0kb downstream 1.0kb downstream 5553   true Chr17: 12890793-12896345 Glycine max
Glyma.17G153700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 12895346-12896345 Glycine max
Glyma.17G153700 2.0kb upstream 2.0kb upstream 6553   true Chr17: 12888793-12895345 Glycine max
Glyma.17G153700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 12888793-12890792 Glycine max
Glyma.17G153700 2.0kb downstream 2.0kb downstream 6553   true Chr17: 12890793-12897345 Glycine max
Glyma.17G153700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 12895346-12897345 Glycine max
Glyma.17G153700 5.0kb upstream 5.0kb upstream 9553   true Chr17: 12885793-12895345 Glycine max
Glyma.17G153700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 12885793-12890792 Glycine max
Glyma.17G153700 5.0kb downstream 5.0kb downstream 9553   true Chr17: 12890793-12900345 Glycine max
Glyma.17G153700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 12895346-12900345 Glycine max
Glyma.17G153700 10.0kb upstream 10.0kb upstream 14553   true Chr17: 12880793-12895345 Glycine max
Glyma.17G153700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 12880793-12890792 Glycine max
Glyma.17G153700 10.0kb downstream 10.0kb downstream 14553   true Chr17: 12890793-12905345 Glycine max
Glyma.17G153700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 12895346-12905345 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307392 5265 Fabidae View MSA
124068007 5270 Rosid View MSA
123749839 5271 Pentapetalae View MSA
122786941 5272 Eudicot View MSA
122045022 5273 Angiosperm View MSA
121347304 5274 Embryophyte View MSA
123428664 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5497 0.0 29.6084   Low
cufflinks 9.85478 0.0 27.8347   Low
cufflinks 15.8859 0.0 43.0692    
cufflinks 14.3179 0.0 39.1151    
cufflinks 12.6256 0.0 34.8611    
cufflinks 17.5568 0.0 47.4244    
cufflinks 23.8719 0.0 63.834 High High
cufflinks 12.0706 0.0 33.4083    
cufflinks 20.59 0.0 55.2336 High High
cufflinks 1.935       Low
cufflinks 3.271       High
cufflinks 3.789       High
cufflinks 2.677        
cufflinks 2.09        
cufflinks 3.85       High
cufflinks 2.213        
cufflinks 1.755       Low
cufflinks 3.16        
cufflinks 2.102        
cufflinks 2.603        
cufflinks 2.846        
cufflinks 2.222        
cufflinks 1.781       Low
cufflinks 3.445       High
cufflinks 2.317        
cufflinks 2.466        

0 Strain