Gene : Glyma.17G154800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31747:SF1 - PROTEIN LOL1 Genomic Order:  1548
Name:  ? Glyma.17G154800 Secondary Identifier:  ? PAC:30479538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G154800 0.5kb upstream 0.5kb upstream 3208   true Chr17: 13072826-13076033 Glycine max
Glyma.17G154800 0.5kb upstream 0.5kb upstream 500   false Chr17: 13072826-13073325 Glycine max
Glyma.17G154800 0.5kb downstream 0.5kb downstream 3208   true Chr17: 13073326-13076533 Glycine max
Glyma.17G154800 0.5kb downstream 0.5kb downstream 500   false Chr17: 13076034-13076533 Glycine max
Glyma.17G154800 1.0kb upstream 1.0kb upstream 3708   true Chr17: 13072326-13076033 Glycine max
Glyma.17G154800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13072326-13073325 Glycine max
Glyma.17G154800 1.0kb downstream 1.0kb downstream 3708   true Chr17: 13073326-13077033 Glycine max
Glyma.17G154800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13076034-13077033 Glycine max
Glyma.17G154800 2.0kb upstream 2.0kb upstream 4708   true Chr17: 13071326-13076033 Glycine max
Glyma.17G154800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13071326-13073325 Glycine max
Glyma.17G154800 2.0kb downstream 2.0kb downstream 4708   true Chr17: 13073326-13078033 Glycine max
Glyma.17G154800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13076034-13078033 Glycine max
Glyma.17G154800 5.0kb upstream 5.0kb upstream 7708   true Chr17: 13068326-13076033 Glycine max
Glyma.17G154800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13068326-13073325 Glycine max
Glyma.17G154800 5.0kb downstream 5.0kb downstream 7708   true Chr17: 13073326-13081033 Glycine max
Glyma.17G154800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13076034-13081033 Glycine max
Glyma.17G154800 10.0kb upstream 10.0kb upstream 12708   true Chr17: 13063326-13076033 Glycine max
Glyma.17G154800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13063326-13073325 Glycine max
Glyma.17G154800 10.0kb downstream 10.0kb downstream 12708   true Chr17: 13073326-13086033 Glycine max
Glyma.17G154800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13076034-13086033 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310386 5265 Fabidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.03199 0.0 33.783    
cufflinks 45.7036 0.0 162.522 High High
cufflinks 9.67442 0.0 40.6693    
cufflinks 37.5762 0.0 133.253 High High
cufflinks 6.24359 0.0 26.6464    
cufflinks 5.17812 0.0 19.7664    
cufflinks 8.23094 0.0 37.1414    
cufflinks 7.31117 0.0 30.6534    
cufflinks 7.60707 0.0 31.3117    
cufflinks 4.057       High
cufflinks 0.212       Low
cufflinks 1.708        
cufflinks 1.269        
cufflinks 0.742        
cufflinks 0.504        
cufflinks 3.108        
cufflinks 0.327       Low
cufflinks 2.517        
cufflinks 6.269       High
cufflinks 3.116        
cufflinks 0.277       Low
cufflinks 3.505        
cufflinks 2.504        
cufflinks 0.35       Low
cufflinks 3.441        
cufflinks 0.169       Low

0 Strain