Gene : Glyma.17G155900 G. max Wm82.a2.v1
Defline:  (1 of 22) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Genomic Order:  1559
Name:  ? Glyma.17G155900 Secondary Identifier:  ? PAC:30480102
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G155900 0.5kb upstream 0.5kb upstream 2903   true Chr17: 13233561-13236463 Glycine max
Glyma.17G155900 0.5kb upstream 0.5kb upstream 500   false Chr17: 13233561-13234060 Glycine max
Glyma.17G155900 0.5kb downstream 0.5kb downstream 2903   true Chr17: 13234061-13236963 Glycine max
Glyma.17G155900 0.5kb downstream 0.5kb downstream 500   false Chr17: 13236464-13236963 Glycine max
Glyma.17G155900 1.0kb upstream 1.0kb upstream 3403   true Chr17: 13233061-13236463 Glycine max
Glyma.17G155900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13233061-13234060 Glycine max
Glyma.17G155900 1.0kb downstream 1.0kb downstream 3403   true Chr17: 13234061-13237463 Glycine max
Glyma.17G155900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13236464-13237463 Glycine max
Glyma.17G155900 2.0kb upstream 2.0kb upstream 4403   true Chr17: 13232061-13236463 Glycine max
Glyma.17G155900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13232061-13234060 Glycine max
Glyma.17G155900 2.0kb downstream 2.0kb downstream 4403   true Chr17: 13234061-13238463 Glycine max
Glyma.17G155900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13236464-13238463 Glycine max
Glyma.17G155900 5.0kb upstream 5.0kb upstream 7403   true Chr17: 13229061-13236463 Glycine max
Glyma.17G155900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13229061-13234060 Glycine max
Glyma.17G155900 5.0kb downstream 5.0kb downstream 7403   true Chr17: 13234061-13241463 Glycine max
Glyma.17G155900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13236464-13241463 Glycine max
Glyma.17G155900 10.0kb upstream 10.0kb upstream 12403   true Chr17: 13224061-13236463 Glycine max
Glyma.17G155900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13224061-13234060 Glycine max
Glyma.17G155900 10.0kb downstream 10.0kb downstream 12403   true Chr17: 13234061-13246463 Glycine max
Glyma.17G155900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13236464-13246463 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313043 5265 Fabidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105995 0.0 0.418138 Low Low
cufflinks 1.66957 0.0 5.58385    
cufflinks 0.693048 0.0 2.50418    
cufflinks 2.45997 0.0 7.79268    
cufflinks 14.4072 0.0 38.4994   High
cufflinks 29.6874 0.0 80.4999 High High
cufflinks 1.74297 0.0 5.81073    
cufflinks 2.3898 0.0 7.58247    
cufflinks 10.0869 0.0 27.2828    
cufflinks 12.532     High High
cufflinks 0.869        
cufflinks 3.059        
cufflinks 17.484     High High
cufflinks 7.132     High  
cufflinks 0.559        
cufflinks 0.125        
cufflinks 6.545     High  
cufflinks 1.721        
cufflinks 2.663        
cufflinks 0.015     Low Low
cufflinks 0.831        
cufflinks 0.048     Low Low
cufflinks 0.167        
cufflinks 0.556        
cufflinks 0.027     Low Low
cufflinks 3.815        

0 Strain