Gene : Glyma.17G141800 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR12774 - PEROXISOMAL FARNESYLATED PROTEIN Genomic Order:  1418
Name:  ? Glyma.17G141800 Secondary Identifier:  ? PAC:30479492

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G141800 0.5kb upstream 0.5kb upstream 4925   true Chr17: 11529202-11534126 Glycine max
Glyma.17G141800 0.5kb upstream 0.5kb upstream 500   false Chr17: 11533627-11534126 Glycine max
Glyma.17G141800 0.5kb downstream 0.5kb downstream 4925   true Chr17: 11528702-11533626 Glycine max
Glyma.17G141800 0.5kb downstream 0.5kb downstream 500   false Chr17: 11528702-11529201 Glycine max
Glyma.17G141800 1.0kb upstream 1.0kb upstream 5425   true Chr17: 11529202-11534626 Glycine max
Glyma.17G141800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11533627-11534626 Glycine max
Glyma.17G141800 1.0kb downstream 1.0kb downstream 5425   true Chr17: 11528202-11533626 Glycine max
Glyma.17G141800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11528202-11529201 Glycine max
Glyma.17G141800 2.0kb upstream 2.0kb upstream 6425   true Chr17: 11529202-11535626 Glycine max
Glyma.17G141800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11533627-11535626 Glycine max
Glyma.17G141800 2.0kb downstream 2.0kb downstream 6425   true Chr17: 11527202-11533626 Glycine max
Glyma.17G141800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11527202-11529201 Glycine max
Glyma.17G141800 5.0kb upstream 5.0kb upstream 9425   true Chr17: 11529202-11538626 Glycine max
Glyma.17G141800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11533627-11538626 Glycine max
Glyma.17G141800 5.0kb downstream 5.0kb downstream 9425   true Chr17: 11524202-11533626 Glycine max
Glyma.17G141800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11524202-11529201 Glycine max
Glyma.17G141800 10.0kb upstream 10.0kb upstream 14425   true Chr17: 11529202-11543626 Glycine max
Glyma.17G141800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11533627-11543626 Glycine max
Glyma.17G141800 10.0kb downstream 10.0kb downstream 14425   true Chr17: 11519202-11533626 Glycine max
Glyma.17G141800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11519202-11529201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299019 5265 Fabidae View MSA
124060598 5270 Rosid View MSA
123741651 5271 Pentapetalae View MSA
122786771 5272 Eudicot View MSA
122041599 5273 Angiosperm View MSA
121347207 5274 Embryophyte View MSA
123425980 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0296 0.0 79.8767   High
cufflinks 12.7485 0.0 49.7004   Low
cufflinks 15.093 0.0 46.3784    
cufflinks 14.9399 0.0 59.4146    
cufflinks 14.3874 0.0 44.671    
cufflinks 14.9628 0.0 46.1182    
cufflinks 22.2238 0.0 82.6602 High High
cufflinks 16.6187 0.0 63.4372    
cufflinks 17.9062 0.0 54.1612    
cufflinks 1.808        
cufflinks 1.549        
cufflinks 2.088       High
cufflinks 1.826        
cufflinks 2.057        
cufflinks 1.773        
cufflinks 1.753        
cufflinks 1.227       Low
cufflinks 1.957        
cufflinks 1.79        
cufflinks 2.196       High
cufflinks 1.545        
cufflinks 2.128       High
cufflinks 1.703        
cufflinks 1.538        
cufflinks 1.95        
cufflinks 1.366       Low

0 Strain