Gene : Glyma.17G142900 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  1429
Name:  ? Glyma.17G142900 Secondary Identifier:  ? PAC:30480083
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G142900 0.5kb upstream 0.5kb upstream 4607   true Chr17: 11617843-11622449 Glycine max
Glyma.17G142900 0.5kb upstream 0.5kb upstream 500   false Chr17: 11621950-11622449 Glycine max
Glyma.17G142900 0.5kb downstream 0.5kb downstream 4607   true Chr17: 11617343-11621949 Glycine max
Glyma.17G142900 0.5kb downstream 0.5kb downstream 500   false Chr17: 11617343-11617842 Glycine max
Glyma.17G142900 1.0kb upstream 1.0kb upstream 5107   true Chr17: 11617843-11622949 Glycine max
Glyma.17G142900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11621950-11622949 Glycine max
Glyma.17G142900 1.0kb downstream 1.0kb downstream 5107   true Chr17: 11616843-11621949 Glycine max
Glyma.17G142900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11616843-11617842 Glycine max
Glyma.17G142900 2.0kb upstream 2.0kb upstream 6107   true Chr17: 11617843-11623949 Glycine max
Glyma.17G142900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11621950-11623949 Glycine max
Glyma.17G142900 2.0kb downstream 2.0kb downstream 6107   true Chr17: 11615843-11621949 Glycine max
Glyma.17G142900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11615843-11617842 Glycine max
Glyma.17G142900 5.0kb upstream 5.0kb upstream 9107   true Chr17: 11617843-11626949 Glycine max
Glyma.17G142900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11621950-11626949 Glycine max
Glyma.17G142900 5.0kb downstream 5.0kb downstream 9107   true Chr17: 11612843-11621949 Glycine max
Glyma.17G142900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11612843-11617842 Glycine max
Glyma.17G142900 10.0kb upstream 10.0kb upstream 14107   true Chr17: 11617843-11631949 Glycine max
Glyma.17G142900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11621950-11631949 Glycine max
Glyma.17G142900 10.0kb downstream 10.0kb downstream 14107   true Chr17: 11607843-11621949 Glycine max
Glyma.17G142900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11607843-11617842 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301283 5265 Fabidae View MSA
124050253 5270 Rosid View MSA
123741992 5271 Pentapetalae View MSA
122794510 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.899322 0.0 3.14588    
cufflinks 0.0553232 0.0 0.221728 Low Low
cufflinks 1.61994 0.0 5.27804    
cufflinks 3.83412 0.0 11.1049    
cufflinks 1.73624 0.0 5.63607    
cufflinks 0.373732 0.0 1.38398    
cufflinks 0.0428173 0.0 0.173685 Low Low
cufflinks 16.2551 0.0 43.4239   High
cufflinks 1.95614 0.0 6.22685    
cufflinks 3.003       High
cufflinks 0.076       Low
cufflinks 1.68       High
cufflinks 0.857        
cufflinks 0.154        
cufflinks 0.372        
cufflinks 1.039        
cufflinks 1.304        
cufflinks 0.885        
cufflinks 0.024     Low Low
cufflinks 0.704        
cufflinks 0.142        
cufflinks 0.797        
cufflinks 0.191        
cufflinks 0.159        
cufflinks 0.931        
cufflinks 0.213        

0 Strain