Gene : Glyma.17G143400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF01987 - Mitochondrial biogenesis AIM24 (AIM24) Genomic Order:  1434
Name:  ? Glyma.17G143400 Secondary Identifier:  ? PAC:30481549
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G143400 0.5kb upstream 0.5kb upstream 7479   true Chr17: 11653327-11660805 Glycine max
Glyma.17G143400 0.5kb upstream 0.5kb upstream 500   false Chr17: 11660306-11660805 Glycine max
Glyma.17G143400 0.5kb downstream 0.5kb downstream 7479   true Chr17: 11652827-11660305 Glycine max
Glyma.17G143400 0.5kb downstream 0.5kb downstream 500   false Chr17: 11652827-11653326 Glycine max
Glyma.17G143400 1.0kb upstream 1.0kb upstream 7979   true Chr17: 11653327-11661305 Glycine max
Glyma.17G143400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11660306-11661305 Glycine max
Glyma.17G143400 1.0kb downstream 1.0kb downstream 7979   true Chr17: 11652327-11660305 Glycine max
Glyma.17G143400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11652327-11653326 Glycine max
Glyma.17G143400 2.0kb upstream 2.0kb upstream 8979   true Chr17: 11653327-11662305 Glycine max
Glyma.17G143400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11660306-11662305 Glycine max
Glyma.17G143400 2.0kb downstream 2.0kb downstream 8979   true Chr17: 11651327-11660305 Glycine max
Glyma.17G143400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11651327-11653326 Glycine max
Glyma.17G143400 5.0kb upstream 5.0kb upstream 11979   true Chr17: 11653327-11665305 Glycine max
Glyma.17G143400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11660306-11665305 Glycine max
Glyma.17G143400 5.0kb downstream 5.0kb downstream 11979   true Chr17: 11648327-11660305 Glycine max
Glyma.17G143400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11648327-11653326 Glycine max
Glyma.17G143400 10.0kb upstream 10.0kb upstream 16979   true Chr17: 11653327-11670305 Glycine max
Glyma.17G143400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11660306-11670305 Glycine max
Glyma.17G143400 10.0kb downstream 10.0kb downstream 16979   true Chr17: 11643327-11660305 Glycine max
Glyma.17G143400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11643327-11653326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308859 5265 Fabidae View MSA
124067362 5270 Rosid View MSA
123753583 5271 Pentapetalae View MSA
122791584 5272 Eudicot View MSA
122043838 5273 Angiosperm View MSA
121310198 5274 Embryophyte View MSA
123347756 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.43748 0.0 29.018   Low
cufflinks 8.59896 0.0 29.3652   Low
cufflinks 8.95465 0.0 39.9513    
cufflinks 9.48197 0.0 42.2834    
cufflinks 10.4352 0.0 45.1754    
cufflinks 12.6583 0.0 45.9682   High
cufflinks 10.6859 0.0 40.1818    
cufflinks 11.5621 0.0 47.9036    
cufflinks 11.548 0.0 47.7956    
cufflinks 0.581        
cufflinks 0.484        
cufflinks 0.52        
cufflinks 0.665       High
cufflinks 0.64       High
cufflinks 0.558        
cufflinks 0.449        
cufflinks 0.342       Low
cufflinks 0.618       High
cufflinks 0.475        
cufflinks 0.425        
cufflinks 0.417        
cufflinks 0.501        
cufflinks 0.504        
cufflinks 0.494        
cufflinks 0.427        
cufflinks 0.446        

0 Strain