Gene : Glyma.17G144100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24078:SF280 - MYB TRANSCRIPTION FACTOR Genomic Order:  1441
Name:  ? Glyma.17G144100 Secondary Identifier:  ? PAC:30482354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G144100 0.5kb upstream 0.5kb upstream 4628   true Chr17: 11769385-11774012 Glycine max
Glyma.17G144100 0.5kb upstream 0.5kb upstream 500   false Chr17: 11773513-11774012 Glycine max
Glyma.17G144100 0.5kb downstream 0.5kb downstream 4628   true Chr17: 11768885-11773512 Glycine max
Glyma.17G144100 0.5kb downstream 0.5kb downstream 500   false Chr17: 11768885-11769384 Glycine max
Glyma.17G144100 1.0kb upstream 1.0kb upstream 5128   true Chr17: 11769385-11774512 Glycine max
Glyma.17G144100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11773513-11774512 Glycine max
Glyma.17G144100 1.0kb downstream 1.0kb downstream 5128   true Chr17: 11768385-11773512 Glycine max
Glyma.17G144100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11768385-11769384 Glycine max
Glyma.17G144100 2.0kb upstream 2.0kb upstream 6128   true Chr17: 11769385-11775512 Glycine max
Glyma.17G144100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11773513-11775512 Glycine max
Glyma.17G144100 2.0kb downstream 2.0kb downstream 6128   true Chr17: 11767385-11773512 Glycine max
Glyma.17G144100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11767385-11769384 Glycine max
Glyma.17G144100 5.0kb upstream 5.0kb upstream 9128   true Chr17: 11769385-11778512 Glycine max
Glyma.17G144100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11773513-11778512 Glycine max
Glyma.17G144100 5.0kb downstream 5.0kb downstream 9128   true Chr17: 11764385-11773512 Glycine max
Glyma.17G144100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11764385-11769384 Glycine max
Glyma.17G144100 10.0kb upstream 10.0kb upstream 14128   true Chr17: 11769385-11783512 Glycine max
Glyma.17G144100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11773513-11783512 Glycine max
Glyma.17G144100 10.0kb downstream 10.0kb downstream 14128   true Chr17: 11759385-11773512 Glycine max
Glyma.17G144100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11759385-11769384 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300391 5265 Fabidae View MSA
124065296 5270 Rosid View MSA
123744920 5271 Pentapetalae View MSA
122787760 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.8212 0.0 53.1666    
cufflinks 23.0567 0.0 69.0723 High High
cufflinks 27.0913 0.0 82.182 High High
cufflinks 16.7988 0.0 49.7699    
cufflinks 15.0392 0.0 44.8337    
cufflinks 17.8456 0.0 53.2335    
cufflinks 17.051 0.0 50.9024    
cufflinks 15.3905 0.0 46.0447    
cufflinks 15.9695 0.0 47.757    
cufflinks 4.447        
cufflinks 6.879     High  
cufflinks 9.879     High  
cufflinks 3.459       Low
cufflinks 3.095       Low
cufflinks 7.355     High  
cufflinks 15.86     High High
cufflinks 3.264       Low
cufflinks 9.105     High  
cufflinks 9.87     High  
cufflinks 24.125     High High
cufflinks 5.795     High  
cufflinks 17.851     High High
cufflinks 10.069     High  
cufflinks 7.823     High  
cufflinks 20.11     High High
cufflinks 5.953        

0 Strain