Gene : Glyma.17G201000 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG1863 - Ubiquitin carboxyl-terminal hydrolase Genomic Order:  2010
Name:  ? Glyma.17G201000 Secondary Identifier:  ? PAC:30481041
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G201000 0.5kb upstream 0.5kb upstream 10570   true Chr17: 31946807-31957376 Glycine max
Glyma.17G201000 0.5kb upstream 0.5kb upstream 500   false Chr17: 31956877-31957376 Glycine max
Glyma.17G201000 0.5kb downstream 0.5kb downstream 10570   true Chr17: 31946307-31956876 Glycine max
Glyma.17G201000 0.5kb downstream 0.5kb downstream 500   false Chr17: 31946307-31946806 Glycine max
Glyma.17G201000 1.0kb upstream 1.0kb upstream 11070   true Chr17: 31946807-31957876 Glycine max
Glyma.17G201000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 31956877-31957876 Glycine max
Glyma.17G201000 1.0kb downstream 1.0kb downstream 11070   true Chr17: 31945807-31956876 Glycine max
Glyma.17G201000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 31945807-31946806 Glycine max
Glyma.17G201000 2.0kb upstream 2.0kb upstream 12070   true Chr17: 31946807-31958876 Glycine max
Glyma.17G201000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 31956877-31958876 Glycine max
Glyma.17G201000 2.0kb downstream 2.0kb downstream 12070   true Chr17: 31944807-31956876 Glycine max
Glyma.17G201000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 31944807-31946806 Glycine max
Glyma.17G201000 5.0kb upstream 5.0kb upstream 15070   true Chr17: 31946807-31961876 Glycine max
Glyma.17G201000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 31956877-31961876 Glycine max
Glyma.17G201000 5.0kb downstream 5.0kb downstream 15070   true Chr17: 31941807-31956876 Glycine max
Glyma.17G201000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 31941807-31946806 Glycine max
Glyma.17G201000 10.0kb upstream 10.0kb upstream 20070   true Chr17: 31946807-31966876 Glycine max
Glyma.17G201000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 31956877-31966876 Glycine max
Glyma.17G201000 10.0kb downstream 10.0kb downstream 20070   true Chr17: 31936807-31956876 Glycine max
Glyma.17G201000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 31936807-31946806 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309346 5265 Fabidae View MSA
124061105 5270 Rosid View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.924785 0.0 3.36398    
cufflinks 1.97375 0.0 7.26171    
cufflinks 0.587415 0.0 3.15773   Low
cufflinks 3.6553 0.0 13.4211   High
cufflinks 1.03174 0.0 4.70601    
cufflinks 0.423534 0.0 1.83978   Low
cufflinks 7.11555 0.0 21.273   High
cufflinks 1.19177 0.0 5.11247    
cufflinks 1.55102 0.0 6.17941    
cufflinks 0.225        
cufflinks 0.03     Low Low
cufflinks 0.329        
cufflinks 0.273        
cufflinks 0.357        
cufflinks 0.253        
cufflinks 0.216        
cufflinks 0.087        
cufflinks 0.33        
cufflinks 0.655       High
cufflinks 0.142        
cufflinks 0.073       Low
cufflinks 0.217        
cufflinks 0.281        
cufflinks 0.042     Low Low
cufflinks 0.217        
cufflinks 0.091        

0 Strain