Gene : Glyma.17G201600 G. max Wm82.a2.v1
Defline:  (1 of 23) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  2016
Name:  ? Glyma.17G201600 Secondary Identifier:  ? PAC:30482161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G201600 0.5kb upstream 0.5kb upstream 4805   true Chr17: 32062968-32067772 Glycine max
Glyma.17G201600 0.5kb upstream 0.5kb upstream 500   false Chr17: 32062968-32063467 Glycine max
Glyma.17G201600 0.5kb downstream 0.5kb downstream 4805   true Chr17: 32063468-32068272 Glycine max
Glyma.17G201600 0.5kb downstream 0.5kb downstream 500   false Chr17: 32067773-32068272 Glycine max
Glyma.17G201600 1.0kb upstream 1.0kb upstream 5305   true Chr17: 32062468-32067772 Glycine max
Glyma.17G201600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 32062468-32063467 Glycine max
Glyma.17G201600 1.0kb downstream 1.0kb downstream 5305   true Chr17: 32063468-32068772 Glycine max
Glyma.17G201600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 32067773-32068772 Glycine max
Glyma.17G201600 2.0kb upstream 2.0kb upstream 6305   true Chr17: 32061468-32067772 Glycine max
Glyma.17G201600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 32061468-32063467 Glycine max
Glyma.17G201600 2.0kb downstream 2.0kb downstream 6305   true Chr17: 32063468-32069772 Glycine max
Glyma.17G201600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 32067773-32069772 Glycine max
Glyma.17G201600 5.0kb upstream 5.0kb upstream 9305   true Chr17: 32058468-32067772 Glycine max
Glyma.17G201600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 32058468-32063467 Glycine max
Glyma.17G201600 5.0kb downstream 5.0kb downstream 9305   true Chr17: 32063468-32072772 Glycine max
Glyma.17G201600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 32067773-32072772 Glycine max
Glyma.17G201600 10.0kb upstream 10.0kb upstream 14305   true Chr17: 32053468-32067772 Glycine max
Glyma.17G201600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 32053468-32063467 Glycine max
Glyma.17G201600 10.0kb downstream 10.0kb downstream 14305   true Chr17: 32063468-32077772 Glycine max
Glyma.17G201600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 32067773-32077772 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308234 5265 Fabidae View MSA
124060724 5270 Rosid View MSA
123739839 5271 Pentapetalae View MSA
122789200 5272 Eudicot View MSA
122042948 5273 Angiosperm View MSA
121347076 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.0081 0.0 243.631 High High
cufflinks 42.4927 0.0 161.387 High High
cufflinks 17.0925 0.0 61.4643    
cufflinks 26.6394 0.0 97.039 High  
cufflinks 8.77738 0.0 35.8289   Low
cufflinks 7.11168 0.0 30.5764   Low
cufflinks 26.2636 0.0 95.8677 High  
cufflinks 19.595 0.0 70.4348    
cufflinks 8.68463 0.0 35.6319   Low
cufflinks 4.352        
cufflinks 1.512        
cufflinks 4.509        
cufflinks 0.631       Low
cufflinks 0.604       Low
cufflinks 0.764       Low
cufflinks 8.536     High High
cufflinks 0.839       Low
cufflinks 4.367        
cufflinks 4.994        
cufflinks 8.768     High High
cufflinks 1.302        
cufflinks 8.225     High High
cufflinks 7.399        
cufflinks 1.639        
cufflinks 9.485     High High
cufflinks 0.591       Low

0 Strain