Gene : Glyma.17G202000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32382:SF15 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3-RELATED Genomic Order:  2020
Name:  ? Glyma.17G202000 Secondary Identifier:  ? PAC:30478545
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G202000 0.5kb upstream 0.5kb upstream 1581   true Chr17: 32165328-32166908 Glycine max
Glyma.17G202000 0.5kb upstream 0.5kb upstream 500   false Chr17: 32165328-32165827 Glycine max
Glyma.17G202000 0.5kb downstream 0.5kb downstream 1581   true Chr17: 32165828-32167408 Glycine max
Glyma.17G202000 0.5kb downstream 0.5kb downstream 500   false Chr17: 32166909-32167408 Glycine max
Glyma.17G202000 1.0kb upstream 1.0kb upstream 2081   true Chr17: 32164828-32166908 Glycine max
Glyma.17G202000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 32164828-32165827 Glycine max
Glyma.17G202000 1.0kb downstream 1.0kb downstream 2081   true Chr17: 32165828-32167908 Glycine max
Glyma.17G202000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 32166909-32167908 Glycine max
Glyma.17G202000 2.0kb upstream 2.0kb upstream 3081   true Chr17: 32163828-32166908 Glycine max
Glyma.17G202000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 32163828-32165827 Glycine max
Glyma.17G202000 2.0kb downstream 2.0kb downstream 3081   true Chr17: 32165828-32168908 Glycine max
Glyma.17G202000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 32166909-32168908 Glycine max
Glyma.17G202000 5.0kb upstream 5.0kb upstream 6081   true Chr17: 32160828-32166908 Glycine max
Glyma.17G202000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 32160828-32165827 Glycine max
Glyma.17G202000 5.0kb downstream 5.0kb downstream 6081   true Chr17: 32165828-32171908 Glycine max
Glyma.17G202000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 32166909-32171908 Glycine max
Glyma.17G202000 10.0kb upstream 10.0kb upstream 11081   true Chr17: 32155828-32166908 Glycine max
Glyma.17G202000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 32155828-32165827 Glycine max
Glyma.17G202000 10.0kb downstream 10.0kb downstream 11081   true Chr17: 32165828-32176908 Glycine max
Glyma.17G202000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 32166909-32176908 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303590 5265 Fabidae View MSA
124069244 5270 Rosid View MSA
123749188 5271 Pentapetalae View MSA
122790622 5272 Eudicot View MSA
122051628 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0271684 0.0 0.12287 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 19.2786 0.0 53.0334   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0998386 0.0 0.408193 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0775656 0.0 0.321218 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.671        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.199        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain