Gene : Glyma.17G192300 G. max Wm82.a2.v1
Defline:  (1 of 1) 3.1.3.23//3.1.3.74 - Pyridoxal phosphatase / Vitamin B6-phosphate phosphatase Genomic Order:  1923
Name:  ? Glyma.17G192300 Secondary Identifier:  ? PAC:30481916
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCOSE1PMETAB-PWY Glycine max pathologic  
Gmax PWY-3881 Glycine max pathologic  
Gmax PWY-7204 Glycine max pathologic  
Gmax PWY-882 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G192300 0.5kb upstream 0.5kb upstream 9653   true Chr17: 27583558-27593210 Glycine max
Glyma.17G192300 0.5kb upstream 0.5kb upstream 500   false Chr17: 27592711-27593210 Glycine max
Glyma.17G192300 0.5kb downstream 0.5kb downstream 9653   true Chr17: 27583058-27592710 Glycine max
Glyma.17G192300 0.5kb downstream 0.5kb downstream 500   false Chr17: 27583058-27583557 Glycine max
Glyma.17G192300 1.0kb upstream 1.0kb upstream 10153   true Chr17: 27583558-27593710 Glycine max
Glyma.17G192300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 27592711-27593710 Glycine max
Glyma.17G192300 1.0kb downstream 1.0kb downstream 10153   true Chr17: 27582558-27592710 Glycine max
Glyma.17G192300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 27582558-27583557 Glycine max
Glyma.17G192300 2.0kb upstream 2.0kb upstream 11153   true Chr17: 27583558-27594710 Glycine max
Glyma.17G192300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 27592711-27594710 Glycine max
Glyma.17G192300 2.0kb downstream 2.0kb downstream 11153   true Chr17: 27581558-27592710 Glycine max
Glyma.17G192300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 27581558-27583557 Glycine max
Glyma.17G192300 5.0kb upstream 5.0kb upstream 14153   true Chr17: 27583558-27597710 Glycine max
Glyma.17G192300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 27592711-27597710 Glycine max
Glyma.17G192300 5.0kb downstream 5.0kb downstream 14153   true Chr17: 27578558-27592710 Glycine max
Glyma.17G192300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 27578558-27583557 Glycine max
Glyma.17G192300 10.0kb upstream 10.0kb upstream 19153   true Chr17: 27583558-27602710 Glycine max
Glyma.17G192300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 27592711-27602710 Glycine max
Glyma.17G192300 10.0kb downstream 10.0kb downstream 19153   true Chr17: 27573558-27592710 Glycine max
Glyma.17G192300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 27573558-27583557 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303217 5265 Fabidae View MSA
124062911 5270 Rosid View MSA
123738949 5271 Pentapetalae View MSA
122790321 5272 Eudicot View MSA
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01914 0.0 6.3593    
cufflinks 1.48898 0.0 4.89615    
cufflinks 1.7828 0.0 5.71098    
cufflinks 1.44057 0.0 4.75262    
cufflinks 1.47513 0.0 4.8464    
cufflinks 0.371476 0.0 1.37202   Low
cufflinks 2.20118 0.0 6.84685    
cufflinks 1.42311 0.0 4.70648    
cufflinks 1.32552 0.0 4.41993    
cufflinks 0.389        
cufflinks 0.244       Low
cufflinks 0.627        
cufflinks 0.601        
cufflinks 0.826       High
cufflinks 0.505        
cufflinks 0.649        
cufflinks 0.283       Low
cufflinks 0.696        
cufflinks 1.001       High
cufflinks 0.482        
cufflinks 0.266       Low
cufflinks 0.546        
cufflinks 0.77       High
cufflinks 0.31       Low
cufflinks 0.566        
cufflinks 0.332        

0 Strain