Gene : Glyma.17G194300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11062:SF108 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  1943
Name:  ? Glyma.17G194300 Secondary Identifier:  ? PAC:30480157
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5980 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G194300 0.5kb upstream 0.5kb upstream 5223   true Chr17: 29063048-29068270 Glycine max
Glyma.17G194300 0.5kb upstream 0.5kb upstream 500   false Chr17: 29067771-29068270 Glycine max
Glyma.17G194300 0.5kb downstream 0.5kb downstream 5223   true Chr17: 29062548-29067770 Glycine max
Glyma.17G194300 0.5kb downstream 0.5kb downstream 500   false Chr17: 29062548-29063047 Glycine max
Glyma.17G194300 1.0kb upstream 1.0kb upstream 5723   true Chr17: 29063048-29068770 Glycine max
Glyma.17G194300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 29067771-29068770 Glycine max
Glyma.17G194300 1.0kb downstream 1.0kb downstream 5723   true Chr17: 29062048-29067770 Glycine max
Glyma.17G194300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 29062048-29063047 Glycine max
Glyma.17G194300 2.0kb upstream 2.0kb upstream 6723   true Chr17: 29063048-29069770 Glycine max
Glyma.17G194300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 29067771-29069770 Glycine max
Glyma.17G194300 2.0kb downstream 2.0kb downstream 6723   true Chr17: 29061048-29067770 Glycine max
Glyma.17G194300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 29061048-29063047 Glycine max
Glyma.17G194300 5.0kb upstream 5.0kb upstream 9723   true Chr17: 29063048-29072770 Glycine max
Glyma.17G194300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 29067771-29072770 Glycine max
Glyma.17G194300 5.0kb downstream 5.0kb downstream 9723   true Chr17: 29058048-29067770 Glycine max
Glyma.17G194300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 29058048-29063047 Glycine max
Glyma.17G194300 10.0kb upstream 10.0kb upstream 14723   true Chr17: 29063048-29077770 Glycine max
Glyma.17G194300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 29067771-29077770 Glycine max
Glyma.17G194300 10.0kb downstream 10.0kb downstream 14723   true Chr17: 29053048-29067770 Glycine max
Glyma.17G194300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 29053048-29063047 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122315003 5265 Fabidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.24 0.0 81.8089   High
cufflinks 2.78657 0.0 12.4688    
cufflinks 11.5611 0.0 51.5037    
cufflinks 7.30887 0.0 33.8511    
cufflinks 1.45317 0.0 8.18222   Low
cufflinks 1.06672 0.0 5.47084   Low
cufflinks 28.3053 0.0 144.076 High High
cufflinks 4.47353 0.0 22.9663    
cufflinks 1.76544 0.0 10.4277    
cufflinks 0.132        
cufflinks 0.084        
cufflinks 0.978       High
cufflinks 0.054     Low Low
cufflinks 0.056     Low Low
cufflinks 0.262        
cufflinks 0.399        
cufflinks 0.131        
cufflinks 0.873       High
cufflinks 0.291        
cufflinks 0.469        
cufflinks 0.076       Low
cufflinks 0.504        
cufflinks 0.749       High
cufflinks 0.107        
cufflinks 0.57        
cufflinks 0.054     Low Low

0 Strain