Gene : Glyma.17G194400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10457//PTHR10457:SF12 - MEVALONATE KINASE/GALACTOKINASE Genomic Order:  1944
Name:  ? Glyma.17G194400 Secondary Identifier:  ? PAC:30480727
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-82 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G194400 0.5kb upstream 0.5kb upstream 14863   true Chr17: 29127421-29142283 Glycine max
Glyma.17G194400 0.5kb upstream 0.5kb upstream 500   false Chr17: 29127421-29127920 Glycine max
Glyma.17G194400 0.5kb downstream 0.5kb downstream 14863   true Chr17: 29127921-29142783 Glycine max
Glyma.17G194400 0.5kb downstream 0.5kb downstream 500   false Chr17: 29142284-29142783 Glycine max
Glyma.17G194400 1.0kb upstream 1.0kb upstream 15363   true Chr17: 29126921-29142283 Glycine max
Glyma.17G194400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 29126921-29127920 Glycine max
Glyma.17G194400 1.0kb downstream 1.0kb downstream 15363   true Chr17: 29127921-29143283 Glycine max
Glyma.17G194400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 29142284-29143283 Glycine max
Glyma.17G194400 2.0kb upstream 2.0kb upstream 16363   true Chr17: 29125921-29142283 Glycine max
Glyma.17G194400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 29125921-29127920 Glycine max
Glyma.17G194400 2.0kb downstream 2.0kb downstream 16363   true Chr17: 29127921-29144283 Glycine max
Glyma.17G194400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 29142284-29144283 Glycine max
Glyma.17G194400 5.0kb upstream 5.0kb upstream 19363   true Chr17: 29122921-29142283 Glycine max
Glyma.17G194400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 29122921-29127920 Glycine max
Glyma.17G194400 5.0kb downstream 5.0kb downstream 19363   true Chr17: 29127921-29147283 Glycine max
Glyma.17G194400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 29142284-29147283 Glycine max
Glyma.17G194400 10.0kb upstream 10.0kb upstream 24363   true Chr17: 29117921-29142283 Glycine max
Glyma.17G194400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 29117921-29127920 Glycine max
Glyma.17G194400 10.0kb downstream 10.0kb downstream 24363   true Chr17: 29127921-29152283 Glycine max
Glyma.17G194400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 29142284-29152283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301745 5265 Fabidae View MSA
124063357 5270 Rosid View MSA
123744762 5271 Pentapetalae View MSA
122790860 5272 Eudicot View MSA
122044133 5273 Angiosperm View MSA
121345310 5274 Embryophyte View MSA
123424614 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.76585 0.0 18.1035    
cufflinks 7.10395 0.0 18.9936    
cufflinks 4.61821 0.0 12.5494    
cufflinks 7.62624 0.0 20.3612   High
cufflinks 5.77624 0.0 15.5374    
cufflinks 6.61219 0.0 17.6992    
cufflinks 3.99664 0.0 10.9955   Low
cufflinks 5.44222 0.0 14.6746    
cufflinks 3.42515 0.0 9.53932   Low
cufflinks 1.245        
cufflinks 0.242       Low
cufflinks 2.743        
cufflinks 1.076        
cufflinks 1.173        
cufflinks 0.033     Low Low
cufflinks 2.18        
cufflinks 0.772        
cufflinks 2.03        
cufflinks 1.635        
cufflinks 2.644        
cufflinks 0.434        
cufflinks 2.278        
cufflinks 1.478        
cufflinks 0.275       Low
cufflinks 2.174        
cufflinks 1.156        

0 Strain