Gene : Glyma.17G197700 G. max Wm82.a2.v1
Genomic Order:  1977 Name:  ? Glyma.17G197700
Secondary Identifier:  ? PAC:30482304
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G197700 0.5kb upstream 0.5kb upstream 2103   true Chr17: 31249085-31251187 Glycine max
Glyma.17G197700 0.5kb upstream 0.5kb upstream 500   false Chr17: 31250688-31251187 Glycine max
Glyma.17G197700 0.5kb downstream 0.5kb downstream 2103   true Chr17: 31248585-31250687 Glycine max
Glyma.17G197700 0.5kb downstream 0.5kb downstream 500   false Chr17: 31248585-31249084 Glycine max
Glyma.17G197700 1.0kb upstream 1.0kb upstream 2603   true Chr17: 31249085-31251687 Glycine max
Glyma.17G197700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 31250688-31251687 Glycine max
Glyma.17G197700 1.0kb downstream 1.0kb downstream 2603   true Chr17: 31248085-31250687 Glycine max
Glyma.17G197700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 31248085-31249084 Glycine max
Glyma.17G197700 2.0kb upstream 2.0kb upstream 3603   true Chr17: 31249085-31252687 Glycine max
Glyma.17G197700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 31250688-31252687 Glycine max
Glyma.17G197700 2.0kb downstream 2.0kb downstream 3603   true Chr17: 31247085-31250687 Glycine max
Glyma.17G197700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 31247085-31249084 Glycine max
Glyma.17G197700 5.0kb upstream 5.0kb upstream 6603   true Chr17: 31249085-31255687 Glycine max
Glyma.17G197700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 31250688-31255687 Glycine max
Glyma.17G197700 5.0kb downstream 5.0kb downstream 6603   true Chr17: 31244085-31250687 Glycine max
Glyma.17G197700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 31244085-31249084 Glycine max
Glyma.17G197700 10.0kb upstream 10.0kb upstream 11603   true Chr17: 31249085-31260687 Glycine max
Glyma.17G197700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 31250688-31260687 Glycine max
Glyma.17G197700 10.0kb downstream 10.0kb downstream 11603   true Chr17: 31239085-31250687 Glycine max
Glyma.17G197700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 31239085-31249084 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313068 5265 Fabidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.4087 0.0 142.144 High High
cufflinks 11.0603 0.0 30.9993    
cufflinks 40.5606 0.0 108.653 High High
cufflinks 17.329 0.0 46.907    
cufflinks 18.302 0.0 49.387    
cufflinks 6.38876 0.0 19.1756   Low
cufflinks 9.93216 0.0 28.1773    
cufflinks 19.9233 0.0 53.5071    
cufflinks 28.8617 0.0 77.002 High  
cufflinks 4.626       Low
cufflinks 79.647     High High
cufflinks 24.998     High  
cufflinks 4.023       Low
cufflinks 3.218       Low
cufflinks 89.638     High High
cufflinks 34.687     High  
cufflinks 6.065       Low
cufflinks 12.108     High  
cufflinks 6.617       Low
cufflinks 33.699     High  
cufflinks 107.034     High High
cufflinks 44.178     High  
cufflinks 26.312     High  
cufflinks 85.284     High High
cufflinks 39.248     High  
cufflinks 37.98     High  

0 Strain