Gene : Glyma.17G200200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13182 - ZINC FINGER PROTEIN 622 Genomic Order:  2002
Name:  ? Glyma.17G200200 Secondary Identifier:  ? PAC:30480728
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G200200 0.5kb upstream 0.5kb upstream 3707   true Chr17: 31839773-31843479 Glycine max
Glyma.17G200200 0.5kb upstream 0.5kb upstream 500   false Chr17: 31839773-31840272 Glycine max
Glyma.17G200200 0.5kb downstream 0.5kb downstream 3707   true Chr17: 31840273-31843979 Glycine max
Glyma.17G200200 0.5kb downstream 0.5kb downstream 500   false Chr17: 31843480-31843979 Glycine max
Glyma.17G200200 1.0kb upstream 1.0kb upstream 4207   true Chr17: 31839273-31843479 Glycine max
Glyma.17G200200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 31839273-31840272 Glycine max
Glyma.17G200200 1.0kb downstream 1.0kb downstream 4207   true Chr17: 31840273-31844479 Glycine max
Glyma.17G200200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 31843480-31844479 Glycine max
Glyma.17G200200 2.0kb upstream 2.0kb upstream 5207   true Chr17: 31838273-31843479 Glycine max
Glyma.17G200200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 31838273-31840272 Glycine max
Glyma.17G200200 2.0kb downstream 2.0kb downstream 5207   true Chr17: 31840273-31845479 Glycine max
Glyma.17G200200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 31843480-31845479 Glycine max
Glyma.17G200200 5.0kb upstream 5.0kb upstream 8207   true Chr17: 31835273-31843479 Glycine max
Glyma.17G200200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 31835273-31840272 Glycine max
Glyma.17G200200 5.0kb downstream 5.0kb downstream 8207   true Chr17: 31840273-31848479 Glycine max
Glyma.17G200200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 31843480-31848479 Glycine max
Glyma.17G200200 10.0kb upstream 10.0kb upstream 13207   true Chr17: 31830273-31843479 Glycine max
Glyma.17G200200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 31830273-31840272 Glycine max
Glyma.17G200200 10.0kb downstream 10.0kb downstream 13207   true Chr17: 31840273-31853479 Glycine max
Glyma.17G200200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 31843480-31853479 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298983 5265 Fabidae View MSA
124067719 5270 Rosid View MSA
123740020 5271 Pentapetalae View MSA
122793770 5272 Eudicot View MSA
122048064 5273 Angiosperm View MSA
121347458 5274 Embryophyte View MSA
123428523 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.98537 0.0 21.996    
cufflinks 10.1772 0.0 27.5584   High
cufflinks 5.84653 0.0 16.5412   Low
cufflinks 7.87065 0.0 21.6814    
cufflinks 7.2063 0.0 20.0334    
cufflinks 7.08875 0.0 19.7358    
cufflinks 10.4936 0.0 28.3927   High
cufflinks 8.26765 0.0 22.6837    
cufflinks 8.08044 0.0 22.2223    
cufflinks 3.895       Low
cufflinks 4.948        
cufflinks 4.379        
cufflinks 5.312        
cufflinks 6.43       High
cufflinks 4.566        
cufflinks 4.33        
cufflinks 5.263        
cufflinks 4.28        
cufflinks 6.262       High
cufflinks 4.254        
cufflinks 4.976        
cufflinks 4.7        
cufflinks 6.227       High
cufflinks 5.254        
cufflinks 4.282        
cufflinks 5.839       High

0 Strain