Gene : Glyma.17G185500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11700:SF7 - 40S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Genomic Order:  1855
Name:  ? Glyma.17G185500 Secondary Identifier:  ? PAC:30480515
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G185500 0.5kb upstream 0.5kb upstream 1888   true Chr17: 23569868-23571755 Glycine max
Glyma.17G185500 0.5kb upstream 0.5kb upstream 500   false Chr17: 23571256-23571755 Glycine max
Glyma.17G185500 0.5kb downstream 0.5kb downstream 1888   true Chr17: 23569368-23571255 Glycine max
Glyma.17G185500 0.5kb downstream 0.5kb downstream 500   false Chr17: 23569368-23569867 Glycine max
Glyma.17G185500 1.0kb upstream 1.0kb upstream 2388   true Chr17: 23569868-23572255 Glycine max
Glyma.17G185500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 23571256-23572255 Glycine max
Glyma.17G185500 1.0kb downstream 1.0kb downstream 2388   true Chr17: 23568868-23571255 Glycine max
Glyma.17G185500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 23568868-23569867 Glycine max
Glyma.17G185500 2.0kb upstream 2.0kb upstream 3388   true Chr17: 23569868-23573255 Glycine max
Glyma.17G185500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 23571256-23573255 Glycine max
Glyma.17G185500 2.0kb downstream 2.0kb downstream 3388   true Chr17: 23567868-23571255 Glycine max
Glyma.17G185500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 23567868-23569867 Glycine max
Glyma.17G185500 5.0kb upstream 5.0kb upstream 6388   true Chr17: 23569868-23576255 Glycine max
Glyma.17G185500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 23571256-23576255 Glycine max
Glyma.17G185500 5.0kb downstream 5.0kb downstream 6388   true Chr17: 23564868-23571255 Glycine max
Glyma.17G185500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 23564868-23569867 Glycine max
Glyma.17G185500 10.0kb upstream 10.0kb upstream 11388   true Chr17: 23569868-23581255 Glycine max
Glyma.17G185500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 23571256-23581255 Glycine max
Glyma.17G185500 10.0kb downstream 10.0kb downstream 11388   true Chr17: 23559868-23571255 Glycine max
Glyma.17G185500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 23559868-23569867 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028495 5273 Angiosperm View MSA
122244228 5265 Fabidae Singleton cluster - no MSA
123988581 5270 Rosid Singleton cluster - no MSA
123744881 5271 Pentapetalae View MSA
122794709 5272 Eudicot View MSA
121348119 5274 Embryophyte View MSA
123380732 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.146116 0.0 0.576411 Low  
cufflinks 0.061919 0.0 0.252615 Low  
cufflinks 0.366607 0.0 1.39037    
cufflinks 4.2029 0.0 12.9031   High
cufflinks 0.137044 0.0 0.541763 Low  
cufflinks 0.208633 0.0 0.811708 Low  
cufflinks 0.755098 0.0 2.77388    
cufflinks 0.0478328 0.0 0.198087 Low Low
cufflinks 0.143946 0.0 0.567872 Low  
cufflinks 0.815        
cufflinks 0.284        
cufflinks 0.128        
cufflinks 0.922       High
cufflinks 1.456       High
cufflinks 0.743        
cufflinks 0.012     Low Low
cufflinks 0.865       High
cufflinks 0.193        
cufflinks 0.513        
cufflinks 0.128        
cufflinks 0.139        
cufflinks 0.049     Low Low
cufflinks 0.694        
cufflinks 0.182        
cufflinks 0.116        
cufflinks 0.074        

0 Strain