Gene : Glyma.17G187400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12124:SF47 - EXOSOME COMPONENT 10 Genomic Order:  1874
Name:  ? Glyma.17G187400 Secondary Identifier:  ? PAC:30480799
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G187400 0.5kb upstream 0.5kb upstream 11784   true Chr17: 24004203-24015986 Glycine max
Glyma.17G187400 0.5kb upstream 0.5kb upstream 500   false Chr17: 24015487-24015986 Glycine max
Glyma.17G187400 0.5kb downstream 0.5kb downstream 11784   true Chr17: 24003703-24015486 Glycine max
Glyma.17G187400 0.5kb downstream 0.5kb downstream 500   false Chr17: 24003703-24004202 Glycine max
Glyma.17G187400 1.0kb upstream 1.0kb upstream 12284   true Chr17: 24004203-24016486 Glycine max
Glyma.17G187400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 24015487-24016486 Glycine max
Glyma.17G187400 1.0kb downstream 1.0kb downstream 12284   true Chr17: 24003203-24015486 Glycine max
Glyma.17G187400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 24003203-24004202 Glycine max
Glyma.17G187400 2.0kb upstream 2.0kb upstream 13284   true Chr17: 24004203-24017486 Glycine max
Glyma.17G187400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 24015487-24017486 Glycine max
Glyma.17G187400 2.0kb downstream 2.0kb downstream 13284   true Chr17: 24002203-24015486 Glycine max
Glyma.17G187400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 24002203-24004202 Glycine max
Glyma.17G187400 5.0kb upstream 5.0kb upstream 16284   true Chr17: 24004203-24020486 Glycine max
Glyma.17G187400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 24015487-24020486 Glycine max
Glyma.17G187400 5.0kb downstream 5.0kb downstream 16284   true Chr17: 23999203-24015486 Glycine max
Glyma.17G187400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 23999203-24004202 Glycine max
Glyma.17G187400 10.0kb upstream 10.0kb upstream 21284   true Chr17: 24004203-24025486 Glycine max
Glyma.17G187400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 24015487-24025486 Glycine max
Glyma.17G187400 10.0kb downstream 10.0kb downstream 21284   true Chr17: 23994203-24015486 Glycine max
Glyma.17G187400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 23994203-24004202 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306457 5265 Fabidae View MSA
124068791 5270 Rosid View MSA
123751361 5271 Pentapetalae View MSA
122791739 5272 Eudicot View MSA
122045383 5273 Angiosperm View MSA
121347466 5274 Embryophyte View MSA
123428856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7925 0.0 48.1068   High
cufflinks 9.2159 0.0 31.4444    
cufflinks 10.6644 0.0 36.4814    
cufflinks 9.14289 0.0 31.189    
cufflinks 8.98594 0.0 30.6757    
cufflinks 6.4145 0.0 22.2817   Low
cufflinks 8.56681 0.0 29.2486    
cufflinks 10.7009 0.0 36.772    
cufflinks 8.64133 0.0 29.5578    
cufflinks 1.443       Low
cufflinks 2.182        
cufflinks 1.563        
cufflinks 1.666        
cufflinks 1.714        
cufflinks 2.098        
cufflinks 1.657        
cufflinks 1.999        
cufflinks 1.427       Low
cufflinks 2.048        
cufflinks 1.554        
cufflinks 2.535       High
cufflinks 1.727        
cufflinks 1.756        
cufflinks 2.253        
cufflinks 1.544        
cufflinks 3.348       High

0 Strain