Gene : Glyma.17G189100 G. max Wm82.a2.v1
Defline:  (1 of 136) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  1891
Name:  ? Glyma.17G189100 Secondary Identifier:  ? PAC:30481728
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G189100 0.5kb upstream 0.5kb upstream 10450   true Chr17: 25520331-25530780 Glycine max
Glyma.17G189100 0.5kb upstream 0.5kb upstream 500   false Chr17: 25520331-25520830 Glycine max
Glyma.17G189100 0.5kb downstream 0.5kb downstream 10450   true Chr17: 25520831-25531280 Glycine max
Glyma.17G189100 0.5kb downstream 0.5kb downstream 500   false Chr17: 25530781-25531280 Glycine max
Glyma.17G189100 1.0kb upstream 1.0kb upstream 10950   true Chr17: 25519831-25530780 Glycine max
Glyma.17G189100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 25519831-25520830 Glycine max
Glyma.17G189100 1.0kb downstream 1.0kb downstream 10950   true Chr17: 25520831-25531780 Glycine max
Glyma.17G189100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 25530781-25531780 Glycine max
Glyma.17G189100 2.0kb upstream 2.0kb upstream 11950   true Chr17: 25518831-25530780 Glycine max
Glyma.17G189100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 25518831-25520830 Glycine max
Glyma.17G189100 2.0kb downstream 2.0kb downstream 11950   true Chr17: 25520831-25532780 Glycine max
Glyma.17G189100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 25530781-25532780 Glycine max
Glyma.17G189100 5.0kb upstream 5.0kb upstream 14950   true Chr17: 25515831-25530780 Glycine max
Glyma.17G189100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 25515831-25520830 Glycine max
Glyma.17G189100 5.0kb downstream 5.0kb downstream 14950   true Chr17: 25520831-25535780 Glycine max
Glyma.17G189100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 25530781-25535780 Glycine max
Glyma.17G189100 10.0kb upstream 10.0kb upstream 19950   true Chr17: 25510831-25530780 Glycine max
Glyma.17G189100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 25510831-25520830 Glycine max
Glyma.17G189100 10.0kb downstream 10.0kb downstream 19950   true Chr17: 25520831-25540780 Glycine max
Glyma.17G189100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 25530781-25540780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122315190 5265 Fabidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00545596 0.0 0.0246747 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0129296 0.0 0.0541249 Low  
cufflinks 0.0200147 0.0 0.0817363 Low High
cufflinks 0.00472592 0.0 0.0217117 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0195168 0.0 0.0800592 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0108219 0.0 0.0461212 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain