Gene : Glyma.17G189600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13182 - ZINC FINGER PROTEIN 622 Genomic Order:  1896
Name:  ? Glyma.17G189600 Secondary Identifier:  ? PAC:30479525
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G189600 0.5kb upstream 0.5kb upstream 3758   true Chr17: 25987493-25991250 Glycine max
Glyma.17G189600 0.5kb upstream 0.5kb upstream 500   false Chr17: 25987493-25987992 Glycine max
Glyma.17G189600 0.5kb downstream 0.5kb downstream 3758   true Chr17: 25987993-25991750 Glycine max
Glyma.17G189600 0.5kb downstream 0.5kb downstream 500   false Chr17: 25991251-25991750 Glycine max
Glyma.17G189600 1.0kb upstream 1.0kb upstream 4258   true Chr17: 25986993-25991250 Glycine max
Glyma.17G189600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 25986993-25987992 Glycine max
Glyma.17G189600 1.0kb downstream 1.0kb downstream 4258   true Chr17: 25987993-25992250 Glycine max
Glyma.17G189600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 25991251-25992250 Glycine max
Glyma.17G189600 2.0kb upstream 2.0kb upstream 5258   true Chr17: 25985993-25991250 Glycine max
Glyma.17G189600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 25985993-25987992 Glycine max
Glyma.17G189600 2.0kb downstream 2.0kb downstream 5258   true Chr17: 25987993-25993250 Glycine max
Glyma.17G189600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 25991251-25993250 Glycine max
Glyma.17G189600 5.0kb upstream 5.0kb upstream 8258   true Chr17: 25982993-25991250 Glycine max
Glyma.17G189600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 25982993-25987992 Glycine max
Glyma.17G189600 5.0kb downstream 5.0kb downstream 8258   true Chr17: 25987993-25996250 Glycine max
Glyma.17G189600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 25991251-25996250 Glycine max
Glyma.17G189600 10.0kb upstream 10.0kb upstream 13258   true Chr17: 25977993-25991250 Glycine max
Glyma.17G189600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 25977993-25987992 Glycine max
Glyma.17G189600 10.0kb downstream 10.0kb downstream 13258   true Chr17: 25987993-26001250 Glycine max
Glyma.17G189600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 25991251-26001250 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298983 5265 Fabidae View MSA
124067719 5270 Rosid View MSA
123740020 5271 Pentapetalae View MSA
122793770 5272 Eudicot View MSA
122048064 5273 Angiosperm View MSA
121347458 5274 Embryophyte View MSA
123428523 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.21532 0.0 20.0293    
cufflinks 9.14736 0.0 24.9105    
cufflinks 5.98727 0.0 16.8761   Low
cufflinks 8.98208 0.0 24.4847    
cufflinks 8.09696 0.0 22.2679    
cufflinks 9.53039 0.0 25.9217    
cufflinks 9.63517 0.0 26.1736    
cufflinks 8.32743 0.0 22.8138    
cufflinks 8.3639 0.0 22.9227    
cufflinks 4.219        
cufflinks 4.896        
cufflinks 4.602        
cufflinks 5.562        
cufflinks 6.56       High
cufflinks 4.314        
cufflinks 3.832       Low
cufflinks 6.754     High High
cufflinks 4.378        
cufflinks 5.221        
cufflinks 3.592       Low
cufflinks 5.714        
cufflinks 3.952        
cufflinks 5.744        
cufflinks 5.668        
cufflinks 3.28       Low
cufflinks 5.958        

0 Strain