Gene : Glyma.17G192000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22950:SF278 - AMINO ACID PERMEASE 1-RELATED Genomic Order:  1920
Name:  ? Glyma.17G192000 Secondary Identifier:  ? PAC:30479071
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G192000 0.5kb upstream 0.5kb upstream 7536   true Chr17: 27452179-27459714 Glycine max
Glyma.17G192000 0.5kb upstream 0.5kb upstream 500   false Chr17: 27452179-27452678 Glycine max
Glyma.17G192000 0.5kb downstream 0.5kb downstream 7536   true Chr17: 27452679-27460214 Glycine max
Glyma.17G192000 0.5kb downstream 0.5kb downstream 500   false Chr17: 27459715-27460214 Glycine max
Glyma.17G192000 1.0kb upstream 1.0kb upstream 8036   true Chr17: 27451679-27459714 Glycine max
Glyma.17G192000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 27451679-27452678 Glycine max
Glyma.17G192000 1.0kb downstream 1.0kb downstream 8036   true Chr17: 27452679-27460714 Glycine max
Glyma.17G192000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 27459715-27460714 Glycine max
Glyma.17G192000 2.0kb upstream 2.0kb upstream 9036   true Chr17: 27450679-27459714 Glycine max
Glyma.17G192000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 27450679-27452678 Glycine max
Glyma.17G192000 2.0kb downstream 2.0kb downstream 9036   true Chr17: 27452679-27461714 Glycine max
Glyma.17G192000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 27459715-27461714 Glycine max
Glyma.17G192000 5.0kb upstream 5.0kb upstream 12036   true Chr17: 27447679-27459714 Glycine max
Glyma.17G192000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 27447679-27452678 Glycine max
Glyma.17G192000 5.0kb downstream 5.0kb downstream 12036   true Chr17: 27452679-27464714 Glycine max
Glyma.17G192000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 27459715-27464714 Glycine max
Glyma.17G192000 10.0kb upstream 10.0kb upstream 17036   true Chr17: 27442679-27459714 Glycine max
Glyma.17G192000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 27442679-27452678 Glycine max
Glyma.17G192000 10.0kb downstream 10.0kb downstream 17036   true Chr17: 27452679-27469714 Glycine max
Glyma.17G192000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 27459715-27469714 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255271 5265 Fabidae View MSA
124060792 5270 Rosid View MSA
123749377 5271 Pentapetalae View MSA
122789981 5272 Eudicot View MSA
122044939 5273 Angiosperm View MSA
121310365 5274 Embryophyte View MSA
123347867 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8702 0.0 31.9565    
cufflinks 15.9135 0.0 42.4886    
cufflinks 461.805 0.0 2238.19 High High
cufflinks 3.80223 0.0 11.4028    
cufflinks 3.64382 0.0 11.0259    
cufflinks 1.32532 0.0 4.57379    
cufflinks 0.323161 0.0 1.21947   Low
cufflinks 7.6287 0.0 21.093    
cufflinks 4.08118 0.0 12.127    
cufflinks 1.466        
cufflinks 0.241        
cufflinks 79.481     High High
cufflinks 0.021     Low Low
cufflinks 0.057     Low Low
cufflinks 0.367        
cufflinks 3.272        
cufflinks 1.787        
cufflinks 13.71     High High
cufflinks 5.152        
cufflinks 3.538        
cufflinks 0.583        
cufflinks 4.555        
cufflinks 3.325        
cufflinks 0.361        
cufflinks 2.528        
cufflinks 0.293        

0 Strain