Gene : Glyma.17G175400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1754
Name:  ? Glyma.17G175400 Secondary Identifier:  ? PAC:30478893
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G175400 0.5kb upstream 0.5kb upstream 1663   true Chr17: 18330856-18332518 Glycine max
Glyma.17G175400 0.5kb upstream 0.5kb upstream 500   false Chr17: 18330856-18331355 Glycine max
Glyma.17G175400 0.5kb downstream 0.5kb downstream 1663   true Chr17: 18331356-18333018 Glycine max
Glyma.17G175400 0.5kb downstream 0.5kb downstream 500   false Chr17: 18332519-18333018 Glycine max
Glyma.17G175400 1.0kb upstream 1.0kb upstream 2163   true Chr17: 18330356-18332518 Glycine max
Glyma.17G175400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 18330356-18331355 Glycine max
Glyma.17G175400 1.0kb downstream 1.0kb downstream 2163   true Chr17: 18331356-18333518 Glycine max
Glyma.17G175400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 18332519-18333518 Glycine max
Glyma.17G175400 2.0kb upstream 2.0kb upstream 3163   true Chr17: 18329356-18332518 Glycine max
Glyma.17G175400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 18329356-18331355 Glycine max
Glyma.17G175400 2.0kb downstream 2.0kb downstream 3163   true Chr17: 18331356-18334518 Glycine max
Glyma.17G175400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 18332519-18334518 Glycine max
Glyma.17G175400 5.0kb upstream 5.0kb upstream 6163   true Chr17: 18326356-18332518 Glycine max
Glyma.17G175400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 18326356-18331355 Glycine max
Glyma.17G175400 5.0kb downstream 5.0kb downstream 6163   true Chr17: 18331356-18337518 Glycine max
Glyma.17G175400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 18332519-18337518 Glycine max
Glyma.17G175400 10.0kb upstream 10.0kb upstream 11163   true Chr17: 18321356-18332518 Glycine max
Glyma.17G175400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 18321356-18331355 Glycine max
Glyma.17G175400 10.0kb downstream 10.0kb downstream 11163   true Chr17: 18331356-18342518 Glycine max
Glyma.17G175400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 18332519-18342518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253627 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.22 0.0 36.4356   High
cufflinks 3.3472 0.0 10.9597    
cufflinks 2.17438 0.0 7.47593    
cufflinks 0.203779 0.0 0.79988    
cufflinks 1.41575 0.0 5.0652    
cufflinks 0.831756 0.0 3.07273    
cufflinks 0.0177918 0.0 0.0814901 Low Low
cufflinks 19.0808 0.0 51.3463   High
cufflinks 1.2564 0.0 4.52596    
cufflinks 65.899     High High
cufflinks 7.919     High  
cufflinks 4.416        
cufflinks 3.261        
cufflinks 0.611       Low
cufflinks 0.079       Low
cufflinks 9.09     High  
cufflinks 24.937     High High
cufflinks 0.76       Low
cufflinks 3.75        
cufflinks 3.934        
cufflinks 6.279     High  
cufflinks 6.254        
cufflinks 20.784     High  
cufflinks 5.995        
cufflinks 5.041        
cufflinks 7.028     High  

0 Strain