Gene : Glyma.17G175900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12864//PTHR12864:SF13 - RAN BINDING PROTEIN 9-RELATED Genomic Order:  1759
Name:  ? Glyma.17G175900 Secondary Identifier:  ? PAC:30481426
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G175900 0.5kb upstream 0.5kb upstream 14031   true Chr17: 18476064-18490094 Glycine max
Glyma.17G175900 0.5kb upstream 0.5kb upstream 500   false Chr17: 18476064-18476563 Glycine max
Glyma.17G175900 0.5kb downstream 0.5kb downstream 14031   true Chr17: 18476564-18490594 Glycine max
Glyma.17G175900 0.5kb downstream 0.5kb downstream 500   false Chr17: 18490095-18490594 Glycine max
Glyma.17G175900 1.0kb upstream 1.0kb upstream 14531   true Chr17: 18475564-18490094 Glycine max
Glyma.17G175900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 18475564-18476563 Glycine max
Glyma.17G175900 1.0kb downstream 1.0kb downstream 14531   true Chr17: 18476564-18491094 Glycine max
Glyma.17G175900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 18490095-18491094 Glycine max
Glyma.17G175900 2.0kb upstream 2.0kb upstream 15531   true Chr17: 18474564-18490094 Glycine max
Glyma.17G175900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 18474564-18476563 Glycine max
Glyma.17G175900 2.0kb downstream 2.0kb downstream 15531   true Chr17: 18476564-18492094 Glycine max
Glyma.17G175900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 18490095-18492094 Glycine max
Glyma.17G175900 5.0kb upstream 5.0kb upstream 18531   true Chr17: 18471564-18490094 Glycine max
Glyma.17G175900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 18471564-18476563 Glycine max
Glyma.17G175900 5.0kb downstream 5.0kb downstream 18531   true Chr17: 18476564-18495094 Glycine max
Glyma.17G175900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 18490095-18495094 Glycine max
Glyma.17G175900 10.0kb upstream 10.0kb upstream 23531   true Chr17: 18466564-18490094 Glycine max
Glyma.17G175900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 18466564-18476563 Glycine max
Glyma.17G175900 10.0kb downstream 10.0kb downstream 23531   true Chr17: 18476564-18500094 Glycine max
Glyma.17G175900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 18490095-18500094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299947 5265 Fabidae View MSA
124067431 5270 Rosid View MSA
123740622 5271 Pentapetalae View MSA
122789780 5272 Eudicot View MSA
122043274 5273 Angiosperm View MSA
121347817 5274 Embryophyte View MSA
123424448 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.86909 0.0 13.5511    
cufflinks 2.65773 0.0 7.94605    
cufflinks 6.1038 0.0 16.6641   High
cufflinks 4.84269 0.0 13.4754    
cufflinks 3.09466 0.0 9.05206    
cufflinks 4.24863 0.0 11.9748    
cufflinks 2.05732 0.0 6.3777   Low
cufflinks 3.80259 0.0 10.8512    
cufflinks 2.77952 0.0 8.25318    
cufflinks 0.621       Low
cufflinks 1.798       High
cufflinks 1.062        
cufflinks 0.693       Low
cufflinks 0.617       Low
cufflinks 2.098       High
cufflinks 1.089        
cufflinks 0.908        
cufflinks 1.095        
cufflinks 0.795        
cufflinks 1.201        
cufflinks 1.754       High
cufflinks 1.092        
cufflinks 0.877        
cufflinks 1.705       High
cufflinks 0.974        
cufflinks 1.573        

0 Strain