Gene : Glyma.17G177600 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00160//PF00515 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1) Genomic Order:  1776
Name:  ? Glyma.17G177600 Secondary Identifier:  ? PAC:30480347
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G177600 0.5kb upstream 0.5kb upstream 5573   true Chr17: 19104479-19110051 Glycine max
Glyma.17G177600 0.5kb upstream 0.5kb upstream 500   false Chr17: 19109552-19110051 Glycine max
Glyma.17G177600 0.5kb downstream 0.5kb downstream 5573   true Chr17: 19103979-19109551 Glycine max
Glyma.17G177600 0.5kb downstream 0.5kb downstream 500   false Chr17: 19103979-19104478 Glycine max
Glyma.17G177600 1.0kb upstream 1.0kb upstream 6073   true Chr17: 19104479-19110551 Glycine max
Glyma.17G177600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 19109552-19110551 Glycine max
Glyma.17G177600 1.0kb downstream 1.0kb downstream 6073   true Chr17: 19103479-19109551 Glycine max
Glyma.17G177600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 19103479-19104478 Glycine max
Glyma.17G177600 2.0kb upstream 2.0kb upstream 7073   true Chr17: 19104479-19111551 Glycine max
Glyma.17G177600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 19109552-19111551 Glycine max
Glyma.17G177600 2.0kb downstream 2.0kb downstream 7073   true Chr17: 19102479-19109551 Glycine max
Glyma.17G177600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 19102479-19104478 Glycine max
Glyma.17G177600 5.0kb upstream 5.0kb upstream 10073   true Chr17: 19104479-19114551 Glycine max
Glyma.17G177600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 19109552-19114551 Glycine max
Glyma.17G177600 5.0kb downstream 5.0kb downstream 10073   true Chr17: 19099479-19109551 Glycine max
Glyma.17G177600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 19099479-19104478 Glycine max
Glyma.17G177600 10.0kb upstream 10.0kb upstream 15073   true Chr17: 19104479-19119551 Glycine max
Glyma.17G177600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 19109552-19119551 Glycine max
Glyma.17G177600 10.0kb downstream 10.0kb downstream 15073   true Chr17: 19094479-19109551 Glycine max
Glyma.17G177600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 19094479-19104478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305528 5265 Fabidae View MSA
124069399 5270 Rosid View MSA
123742275 5271 Pentapetalae View MSA
122795031 5272 Eudicot View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34906 0.0 16.2649    
cufflinks 7.57056 0.0 28.3194    
cufflinks 2.7411 0.0 11.8693   Low
cufflinks 4.36132 0.0 16.2176    
cufflinks 8.45755 0.0 30.7259   High
cufflinks 5.65869 0.0 22.8007    
cufflinks 6.06637 0.0 23.8498    
cufflinks 7.36778 0.0 27.7174    
cufflinks 6.75936 0.0 25.8408    
cufflinks 0.952        
cufflinks 0.216       Low
cufflinks 0.959        
cufflinks 1.935       High
cufflinks 3.217       High
cufflinks 0.474        
cufflinks 0.89        
cufflinks 0.748        
cufflinks 0.807        
cufflinks 1.772       High
cufflinks 0.643        
cufflinks 0.384       Low
cufflinks 0.735        
cufflinks 1.255        
cufflinks 0.299       Low
cufflinks 0.729        
cufflinks 0.694        

0 Strain