Gene : Glyma.17G178000 G. max Wm82.a2.v1
Defline:  (1 of 3) PF14693 - Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C) Genomic Order:  1780
Name:  ? Glyma.17G178000 Secondary Identifier:  ? PAC:30480576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G178000 0.5kb upstream 0.5kb upstream 5798   true Chr17: 19168489-19174286 Glycine max
Glyma.17G178000 0.5kb upstream 0.5kb upstream 500   false Chr17: 19173787-19174286 Glycine max
Glyma.17G178000 0.5kb downstream 0.5kb downstream 5798   true Chr17: 19167989-19173786 Glycine max
Glyma.17G178000 0.5kb downstream 0.5kb downstream 500   false Chr17: 19167989-19168488 Glycine max
Glyma.17G178000 1.0kb upstream 1.0kb upstream 6298   true Chr17: 19168489-19174786 Glycine max
Glyma.17G178000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 19173787-19174786 Glycine max
Glyma.17G178000 1.0kb downstream 1.0kb downstream 6298   true Chr17: 19167489-19173786 Glycine max
Glyma.17G178000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 19167489-19168488 Glycine max
Glyma.17G178000 2.0kb upstream 2.0kb upstream 7298   true Chr17: 19168489-19175786 Glycine max
Glyma.17G178000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 19173787-19175786 Glycine max
Glyma.17G178000 2.0kb downstream 2.0kb downstream 7298   true Chr17: 19166489-19173786 Glycine max
Glyma.17G178000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 19166489-19168488 Glycine max
Glyma.17G178000 5.0kb upstream 5.0kb upstream 10298   true Chr17: 19168489-19178786 Glycine max
Glyma.17G178000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 19173787-19178786 Glycine max
Glyma.17G178000 5.0kb downstream 5.0kb downstream 10298   true Chr17: 19163489-19173786 Glycine max
Glyma.17G178000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 19163489-19168488 Glycine max
Glyma.17G178000 10.0kb upstream 10.0kb upstream 15298   true Chr17: 19168489-19183786 Glycine max
Glyma.17G178000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 19173787-19183786 Glycine max
Glyma.17G178000 10.0kb downstream 10.0kb downstream 15298   true Chr17: 19158489-19173786 Glycine max
Glyma.17G178000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 19158489-19168488 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304128 5265 Fabidae View MSA
124065832 5270 Rosid View MSA
123736530 5271 Pentapetalae View MSA
122787810 5272 Eudicot View MSA
122043085 5273 Angiosperm View MSA
121310072 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.645559 0.0 2.48969    
cufflinks 1.50235 0.0 5.57973   High
cufflinks 0.106478 0.0 0.445729 Low Low
cufflinks 0.400953 0.0 1.57693    
cufflinks 1.46784 0.0 5.4485   High
cufflinks 1.19932 0.0 4.49994    
cufflinks 0.213181 0.0 0.857942   Low
cufflinks 0.869479 0.0 3.30784    
cufflinks 0.676652 0.0 2.60267    
cufflinks 0.474        
cufflinks 0.098       Low
cufflinks 0.213        
cufflinks 0.525        
cufflinks 0.56        
cufflinks 0.181        
cufflinks 0.651        
cufflinks 0.218        
cufflinks 0.336        
cufflinks 0.397        
cufflinks 0.656        
cufflinks 0.14       Low
cufflinks 0.733       High
cufflinks 0.466        
cufflinks 0.064       Low
cufflinks 0.691       High
cufflinks 0.284        

0 Strain