Gene : Glyma.17G228400 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  2284
Name:  ? Glyma.17G228400 Secondary Identifier:  ? PAC:30482045
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7601 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G228400 0.5kb upstream 0.5kb upstream 5579   true Chr17: 38332280-38337858 Glycine max
Glyma.17G228400 0.5kb upstream 0.5kb upstream 500   false Chr17: 38332280-38332779 Glycine max
Glyma.17G228400 0.5kb downstream 0.5kb downstream 5579   true Chr17: 38332780-38338358 Glycine max
Glyma.17G228400 0.5kb downstream 0.5kb downstream 500   false Chr17: 38337859-38338358 Glycine max
Glyma.17G228400 1.0kb upstream 1.0kb upstream 6079   true Chr17: 38331780-38337858 Glycine max
Glyma.17G228400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38331780-38332779 Glycine max
Glyma.17G228400 1.0kb downstream 1.0kb downstream 6079   true Chr17: 38332780-38338858 Glycine max
Glyma.17G228400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38337859-38338858 Glycine max
Glyma.17G228400 2.0kb upstream 2.0kb upstream 7079   true Chr17: 38330780-38337858 Glycine max
Glyma.17G228400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38330780-38332779 Glycine max
Glyma.17G228400 2.0kb downstream 2.0kb downstream 7079   true Chr17: 38332780-38339858 Glycine max
Glyma.17G228400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38337859-38339858 Glycine max
Glyma.17G228400 5.0kb upstream 5.0kb upstream 10079   true Chr17: 38327780-38337858 Glycine max
Glyma.17G228400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38327780-38332779 Glycine max
Glyma.17G228400 5.0kb downstream 5.0kb downstream 10079   true Chr17: 38332780-38342858 Glycine max
Glyma.17G228400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38337859-38342858 Glycine max
Glyma.17G228400 10.0kb upstream 10.0kb upstream 15079   true Chr17: 38322780-38337858 Glycine max
Glyma.17G228400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38322780-38332779 Glycine max
Glyma.17G228400 10.0kb downstream 10.0kb downstream 15079   true Chr17: 38332780-38347858 Glycine max
Glyma.17G228400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38337859-38347858 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122311005 5265 Fabidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.99496 0.0 28.2258    
cufflinks 36.0607 0.0 128.451 High High
cufflinks 9.03467 0.0 31.4913    
cufflinks 18.3406 0.0 61.0204    
cufflinks 10.6299 0.0 36.1368    
cufflinks 2.92534 0.0 9.04949   Low
cufflinks 27.3178 0.0 94.2378 High High
cufflinks 16.7567 0.0 56.5088    
cufflinks 5.60425 0.0 21.2943    
cufflinks 5.386        
cufflinks 0.056       Low
cufflinks 2.457        
cufflinks 1.566        
cufflinks 2.465        
cufflinks 0.618        
cufflinks 8.521     High  
cufflinks 0.203        
cufflinks 4.551        
cufflinks 5.968        
cufflinks 13.501     High High
cufflinks 0.06     Low Low
cufflinks 11.014     High  
cufflinks 9.774     High  
cufflinks 0.061       Low
cufflinks 10.45     High  
cufflinks 0.192       Low

0 Strain