Gene : Glyma.17G228700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10071//PTHR10071:SF191 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR Genomic Order:  2287
Name:  ? Glyma.17G228700 Secondary Identifier:  ? PAC:30478969
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G228700 0.5kb upstream 0.5kb upstream 3865   true Chr17: 38363916-38367780 Glycine max
Glyma.17G228700 0.5kb upstream 0.5kb upstream 500   false Chr17: 38363916-38364415 Glycine max
Glyma.17G228700 0.5kb downstream 0.5kb downstream 3865   true Chr17: 38364416-38368280 Glycine max
Glyma.17G228700 0.5kb downstream 0.5kb downstream 500   false Chr17: 38367781-38368280 Glycine max
Glyma.17G228700 1.0kb upstream 1.0kb upstream 4365   true Chr17: 38363416-38367780 Glycine max
Glyma.17G228700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38363416-38364415 Glycine max
Glyma.17G228700 1.0kb downstream 1.0kb downstream 4365   true Chr17: 38364416-38368780 Glycine max
Glyma.17G228700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38367781-38368780 Glycine max
Glyma.17G228700 2.0kb upstream 2.0kb upstream 5365   true Chr17: 38362416-38367780 Glycine max
Glyma.17G228700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38362416-38364415 Glycine max
Glyma.17G228700 2.0kb downstream 2.0kb downstream 5365   true Chr17: 38364416-38369780 Glycine max
Glyma.17G228700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38367781-38369780 Glycine max
Glyma.17G228700 5.0kb upstream 5.0kb upstream 8365   true Chr17: 38359416-38367780 Glycine max
Glyma.17G228700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38359416-38364415 Glycine max
Glyma.17G228700 5.0kb downstream 5.0kb downstream 8365   true Chr17: 38364416-38372780 Glycine max
Glyma.17G228700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38367781-38372780 Glycine max
Glyma.17G228700 10.0kb upstream 10.0kb upstream 13365   true Chr17: 38354416-38367780 Glycine max
Glyma.17G228700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38354416-38364415 Glycine max
Glyma.17G228700 10.0kb downstream 10.0kb downstream 13365   true Chr17: 38364416-38377780 Glycine max
Glyma.17G228700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38367781-38377780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312547 5265 Fabidae View MSA
124071935 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.2566 0.0 18.3565   High
cufflinks 0.292045 0.0 1.12189    
cufflinks 0.804408 0.0 2.94138    
cufflinks 1.72161 0.0 5.96052    
cufflinks 0.245464 0.0 0.951021    
cufflinks 0.0315373 0.0 0.135154 Low Low
cufflinks 0.177131 0.0 0.69488 Low  
cufflinks 0.410085 0.0 1.55141    
cufflinks 1.61251 0.0 5.62586    
cufflinks 0.322        
cufflinks 0.023     Low Low
cufflinks 0.415        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.529        
cufflinks 3.122       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.261        
cufflinks 0.015     Low Low
cufflinks 3.805       High
cufflinks 0.015     Low Low
cufflinks 3.43       High
cufflinks 1.661        
cufflinks 0.011     Low Low
cufflinks 2.393        
cufflinks 0.012     Low Low

0 Strain