Gene : Glyma.17G230200 G. max Wm82.a2.v1
Genomic Order:  2302 Name:  ? Glyma.17G230200
Secondary Identifier:  ? PAC:30479431
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G230200 0.5kb upstream 0.5kb upstream 6616   true Chr17: 38525415-38532030 Glycine max
Glyma.17G230200 0.5kb upstream 0.5kb upstream 500   false Chr17: 38531531-38532030 Glycine max
Glyma.17G230200 0.5kb downstream 0.5kb downstream 6616   true Chr17: 38524915-38531530 Glycine max
Glyma.17G230200 0.5kb downstream 0.5kb downstream 500   false Chr17: 38524915-38525414 Glycine max
Glyma.17G230200 1.0kb upstream 1.0kb upstream 7116   true Chr17: 38525415-38532530 Glycine max
Glyma.17G230200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38531531-38532530 Glycine max
Glyma.17G230200 1.0kb downstream 1.0kb downstream 7116   true Chr17: 38524415-38531530 Glycine max
Glyma.17G230200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38524415-38525414 Glycine max
Glyma.17G230200 2.0kb upstream 2.0kb upstream 8116   true Chr17: 38525415-38533530 Glycine max
Glyma.17G230200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38531531-38533530 Glycine max
Glyma.17G230200 2.0kb downstream 2.0kb downstream 8116   true Chr17: 38523415-38531530 Glycine max
Glyma.17G230200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38523415-38525414 Glycine max
Glyma.17G230200 5.0kb upstream 5.0kb upstream 11116   true Chr17: 38525415-38536530 Glycine max
Glyma.17G230200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38531531-38536530 Glycine max
Glyma.17G230200 5.0kb downstream 5.0kb downstream 11116   true Chr17: 38520415-38531530 Glycine max
Glyma.17G230200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38520415-38525414 Glycine max
Glyma.17G230200 10.0kb upstream 10.0kb upstream 16116   true Chr17: 38525415-38541530 Glycine max
Glyma.17G230200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38531531-38541530 Glycine max
Glyma.17G230200 10.0kb downstream 10.0kb downstream 16116   true Chr17: 38515415-38531530 Glycine max
Glyma.17G230200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38515415-38525414 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026555 5273 Angiosperm View MSA
122296449 5265 Fabidae View MSA
124070957 5270 Rosid View MSA
123740647 5271 Pentapetalae View MSA
122788070 5272 Eudicot View MSA
121349076 5274 Embryophyte View MSA
123381154 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.792324 0.0 2.8249   Low
cufflinks 2.51449 0.0 7.88515   High
cufflinks 0.822117 0.0 2.92386   Low
cufflinks 1.20094 0.0 4.13533    
cufflinks 1.76488 0.0 5.79483    
cufflinks 0.987405 0.0 3.45952    
cufflinks 1.15464 0.0 3.98801    
cufflinks 1.11737 0.0 3.87655    
cufflinks 1.49763 0.0 5.02876    
cufflinks 0.418        
cufflinks 0.305       Low
cufflinks 0.686        
cufflinks 0.869        
cufflinks 0.91        
cufflinks 0.332       Low
cufflinks 0.943        
cufflinks 0.494        
cufflinks 0.556        
cufflinks 1.502       High
cufflinks 0.705        
cufflinks 0.423        
cufflinks 0.802        
cufflinks 1.223       High
cufflinks 0.56        
cufflinks 0.62        
cufflinks 0.633        

0 Strain