Gene : Glyma.17G230500 G. max Wm82.a2.v1
Defline:  (1 of 5) PF01439 - Metallothionein (Metallothio_2) Genomic Order:  2305
Name:  ? Glyma.17G230500 Secondary Identifier:  ? PAC:30482538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G230500 0.5kb upstream 0.5kb upstream 1787   true Chr17: 38558531-38560317 Glycine max
Glyma.17G230500 0.5kb upstream 0.5kb upstream 500   false Chr17: 38558531-38559030 Glycine max
Glyma.17G230500 0.5kb downstream 0.5kb downstream 1787   true Chr17: 38559031-38560817 Glycine max
Glyma.17G230500 0.5kb downstream 0.5kb downstream 500   false Chr17: 38560318-38560817 Glycine max
Glyma.17G230500 1.0kb upstream 1.0kb upstream 2287   true Chr17: 38558031-38560317 Glycine max
Glyma.17G230500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38558031-38559030 Glycine max
Glyma.17G230500 1.0kb downstream 1.0kb downstream 2287   true Chr17: 38559031-38561317 Glycine max
Glyma.17G230500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38560318-38561317 Glycine max
Glyma.17G230500 2.0kb upstream 2.0kb upstream 3287   true Chr17: 38557031-38560317 Glycine max
Glyma.17G230500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38557031-38559030 Glycine max
Glyma.17G230500 2.0kb downstream 2.0kb downstream 3287   true Chr17: 38559031-38562317 Glycine max
Glyma.17G230500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38560318-38562317 Glycine max
Glyma.17G230500 5.0kb upstream 5.0kb upstream 6287   true Chr17: 38554031-38560317 Glycine max
Glyma.17G230500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38554031-38559030 Glycine max
Glyma.17G230500 5.0kb downstream 5.0kb downstream 6287   true Chr17: 38559031-38565317 Glycine max
Glyma.17G230500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38560318-38565317 Glycine max
Glyma.17G230500 10.0kb upstream 10.0kb upstream 11287   true Chr17: 38549031-38560317 Glycine max
Glyma.17G230500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38549031-38559030 Glycine max
Glyma.17G230500 10.0kb downstream 10.0kb downstream 11287   true Chr17: 38559031-38570317 Glycine max
Glyma.17G230500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38560318-38570317 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310811 5265 Fabidae View MSA
124074088 5270 Rosid View MSA
123752973 5271 Pentapetalae View MSA
122795449 5272 Eudicot View MSA
122044110 5273 Angiosperm View MSA
121310239 5274 Embryophyte View MSA
123347784 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1162.27 0.0 4890.25 High  
cufflinks 83.0144 0.0 222.121 High  
cufflinks 322.414 0.0 997.268 High  
cufflinks 112.126 0.0 304.31 High  
cufflinks 1473.17 0.0 6833.33 High  
cufflinks 2250.98 0.0 12250.0 High  
cufflinks 10.6908 0.0 33.2593   Low
cufflinks 1732.39 0.0 8559.78 High  
cufflinks 823.222 0.0 3132.92 High  
cufflinks 66.622     High  
cufflinks 312.818     High  
cufflinks 72.056     High  
cufflinks 86.839     High  
cufflinks 13.988     High Low
cufflinks 135.67     High  
cufflinks 25.193     High  
cufflinks 872.347     High High
cufflinks 33.735     High  
cufflinks 38.463     High  
cufflinks 16.346     High Low
cufflinks 401.304     High High
cufflinks 28.669     High  
cufflinks 28.447     High  
cufflinks 475.591     High High
cufflinks 25.207     High  
cufflinks 1009.071     High High

0 Strain