Gene : Glyma.17G230900 G. max Wm82.a2.v1
Defline:  (1 of 14) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  2309
Name:  ? Glyma.17G230900 Secondary Identifier:  ? PAC:30482310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G230900 0.5kb upstream 0.5kb upstream 10324   true Chr17: 38596404-38606727 Glycine max
Glyma.17G230900 0.5kb upstream 0.5kb upstream 500   false Chr17: 38596404-38596903 Glycine max
Glyma.17G230900 0.5kb downstream 0.5kb downstream 10324   true Chr17: 38596904-38607227 Glycine max
Glyma.17G230900 0.5kb downstream 0.5kb downstream 500   false Chr17: 38606728-38607227 Glycine max
Glyma.17G230900 1.0kb upstream 1.0kb upstream 10824   true Chr17: 38595904-38606727 Glycine max
Glyma.17G230900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38595904-38596903 Glycine max
Glyma.17G230900 1.0kb downstream 1.0kb downstream 10824   true Chr17: 38596904-38607727 Glycine max
Glyma.17G230900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38606728-38607727 Glycine max
Glyma.17G230900 2.0kb upstream 2.0kb upstream 11824   true Chr17: 38594904-38606727 Glycine max
Glyma.17G230900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38594904-38596903 Glycine max
Glyma.17G230900 2.0kb downstream 2.0kb downstream 11824   true Chr17: 38596904-38608727 Glycine max
Glyma.17G230900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38606728-38608727 Glycine max
Glyma.17G230900 5.0kb upstream 5.0kb upstream 14824   true Chr17: 38591904-38606727 Glycine max
Glyma.17G230900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38591904-38596903 Glycine max
Glyma.17G230900 5.0kb downstream 5.0kb downstream 14824   true Chr17: 38596904-38611727 Glycine max
Glyma.17G230900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38606728-38611727 Glycine max
Glyma.17G230900 10.0kb upstream 10.0kb upstream 19824   true Chr17: 38586904-38606727 Glycine max
Glyma.17G230900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38586904-38596903 Glycine max
Glyma.17G230900 10.0kb downstream 10.0kb downstream 19824   true Chr17: 38596904-38616727 Glycine max
Glyma.17G230900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38606728-38616727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299538 5265 Fabidae View MSA
124068290 5270 Rosid View MSA
123746076 5271 Pentapetalae View MSA
122796883 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5708 0.0 83.6105   High
cufflinks 6.1097 0.0 35.4378   Low
cufflinks 8.19734 0.0 44.529    
cufflinks 10.9684 0.0 57.8799    
cufflinks 7.82633 0.0 42.8335    
cufflinks 9.38747 0.0 50.1658    
cufflinks 9.77592 0.0 47.2532    
cufflinks 12.1047 0.0 64.0131    
cufflinks 7.17627 0.0 39.8818    
cufflinks 0.854        
cufflinks 0.674        
cufflinks 0.914       High
cufflinks 0.806        
cufflinks 0.596        
cufflinks 0.58        
cufflinks 0.759        
cufflinks 0.361       Low
cufflinks 0.793        
cufflinks 0.484       Low
cufflinks 0.724        
cufflinks 0.92       High
cufflinks 0.852        
cufflinks 0.67        
cufflinks 0.66        
cufflinks 0.706        
cufflinks 0.655        

0 Strain