Gene : Glyma.17G231400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  2314
Name:  ? Glyma.17G231400 Secondary Identifier:  ? PAC:30482305
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5173 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PYRUVDEHYD-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G231400 0.5kb upstream 0.5kb upstream 4244   true Chr17: 38634893-38639136 Glycine max
Glyma.17G231400 0.5kb upstream 0.5kb upstream 500   false Chr17: 38634893-38635392 Glycine max
Glyma.17G231400 0.5kb downstream 0.5kb downstream 4244   true Chr17: 38635393-38639636 Glycine max
Glyma.17G231400 0.5kb downstream 0.5kb downstream 500   false Chr17: 38639137-38639636 Glycine max
Glyma.17G231400 1.0kb upstream 1.0kb upstream 4744   true Chr17: 38634393-38639136 Glycine max
Glyma.17G231400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38634393-38635392 Glycine max
Glyma.17G231400 1.0kb downstream 1.0kb downstream 4744   true Chr17: 38635393-38640136 Glycine max
Glyma.17G231400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38639137-38640136 Glycine max
Glyma.17G231400 2.0kb upstream 2.0kb upstream 5744   true Chr17: 38633393-38639136 Glycine max
Glyma.17G231400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38633393-38635392 Glycine max
Glyma.17G231400 2.0kb downstream 2.0kb downstream 5744   true Chr17: 38635393-38641136 Glycine max
Glyma.17G231400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38639137-38641136 Glycine max
Glyma.17G231400 5.0kb upstream 5.0kb upstream 8744   true Chr17: 38630393-38639136 Glycine max
Glyma.17G231400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38630393-38635392 Glycine max
Glyma.17G231400 5.0kb downstream 5.0kb downstream 8744   true Chr17: 38635393-38644136 Glycine max
Glyma.17G231400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38639137-38644136 Glycine max
Glyma.17G231400 10.0kb upstream 10.0kb upstream 13744   true Chr17: 38625393-38639136 Glycine max
Glyma.17G231400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38625393-38635392 Glycine max
Glyma.17G231400 10.0kb downstream 10.0kb downstream 13744   true Chr17: 38635393-38649136 Glycine max
Glyma.17G231400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38639137-38649136 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306477 5265 Fabidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.67657 0.0 18.6919    
cufflinks 9.73578 0.0 26.4891    
cufflinks 3.44724 0.0 10.4741   Low
cufflinks 8.2299 0.0 22.6349    
cufflinks 15.6392 0.0 41.7569   High
cufflinks 14.845 0.0 39.6635   High
cufflinks 9.22084 0.0 25.1571    
cufflinks 6.55636 0.0 18.3852    
cufflinks 8.68715 0.0 23.7771    
cufflinks 4.931        
cufflinks 0.687       Low
cufflinks 2.49        
cufflinks 9.156     High High
cufflinks 13.926     High High
cufflinks 1.003       Low
cufflinks 4.027        
cufflinks 2.495        
cufflinks 4.978        
cufflinks 5.245        
cufflinks 2.928        
cufflinks 1.099       Low
cufflinks 3.22        
cufflinks 4.778        
cufflinks 1.167       Low
cufflinks 3.129        
cufflinks 2.004        

0 Strain