Gene : Glyma.17G232200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31490:SF1 - F19C14.2 PROTEIN-RELATED Genomic Order:  2322
Name:  ? Glyma.17G232200 Secondary Identifier:  ? PAC:30482067
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G232200 0.5kb upstream 0.5kb upstream 7165   true Chr17: 38705449-38712613 Glycine max
Glyma.17G232200 0.5kb upstream 0.5kb upstream 500   false Chr17: 38705449-38705948 Glycine max
Glyma.17G232200 0.5kb downstream 0.5kb downstream 7165   true Chr17: 38705949-38713113 Glycine max
Glyma.17G232200 0.5kb downstream 0.5kb downstream 500   false Chr17: 38712614-38713113 Glycine max
Glyma.17G232200 1.0kb upstream 1.0kb upstream 7665   true Chr17: 38704949-38712613 Glycine max
Glyma.17G232200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38704949-38705948 Glycine max
Glyma.17G232200 1.0kb downstream 1.0kb downstream 7665   true Chr17: 38705949-38713613 Glycine max
Glyma.17G232200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38712614-38713613 Glycine max
Glyma.17G232200 2.0kb upstream 2.0kb upstream 8665   true Chr17: 38703949-38712613 Glycine max
Glyma.17G232200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38703949-38705948 Glycine max
Glyma.17G232200 2.0kb downstream 2.0kb downstream 8665   true Chr17: 38705949-38714613 Glycine max
Glyma.17G232200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38712614-38714613 Glycine max
Glyma.17G232200 5.0kb upstream 5.0kb upstream 11665   true Chr17: 38700949-38712613 Glycine max
Glyma.17G232200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38700949-38705948 Glycine max
Glyma.17G232200 5.0kb downstream 5.0kb downstream 11665   true Chr17: 38705949-38717613 Glycine max
Glyma.17G232200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38712614-38717613 Glycine max
Glyma.17G232200 10.0kb upstream 10.0kb upstream 16665   true Chr17: 38695949-38712613 Glycine max
Glyma.17G232200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38695949-38705948 Glycine max
Glyma.17G232200 10.0kb downstream 10.0kb downstream 16665   true Chr17: 38705949-38722613 Glycine max
Glyma.17G232200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38712614-38722613 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303499 5265 Fabidae View MSA
124066828 5270 Rosid View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.40462 0.0 16.9055    
cufflinks 2.93417 0.0 11.2926    
cufflinks 4.07234 0.0 17.9216    
cufflinks 6.87585 0.0 28.148    
cufflinks 3.23941 0.0 13.6315    
cufflinks 4.15923 0.0 18.2824    
cufflinks 2.56931 0.0 12.7905   Low
cufflinks 9.3729 0.0 36.7457   High
cufflinks 6.38784 0.0 25.6307    
cufflinks 0.471        
cufflinks 0.264        
cufflinks 0.536       High
cufflinks 0.479       High
cufflinks 0.28        
cufflinks 0.143       Low
cufflinks 0.26        
cufflinks 0.426        
cufflinks 0.554       High
cufflinks 0.367        
cufflinks 0.273        
cufflinks 0.372        
cufflinks 0.321        
cufflinks 0.227       Low
cufflinks 0.373        
cufflinks 0.279        
cufflinks 0.377        

0 Strain