Gene : Glyma.17G222800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11941:SF96 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL Genomic Order:  2228
Name:  ? Glyma.17G222800 Secondary Identifier:  ? PAC:30479048
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7574 Glycine max pathologic  
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G222800 0.5kb upstream 0.5kb upstream 9580   true Chr17: 37573794-37583373 Glycine max
Glyma.17G222800 0.5kb upstream 0.5kb upstream 500   false Chr17: 37582874-37583373 Glycine max
Glyma.17G222800 0.5kb downstream 0.5kb downstream 9580   true Chr17: 37573294-37582873 Glycine max
Glyma.17G222800 0.5kb downstream 0.5kb downstream 500   false Chr17: 37573294-37573793 Glycine max
Glyma.17G222800 1.0kb upstream 1.0kb upstream 10080   true Chr17: 37573794-37583873 Glycine max
Glyma.17G222800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 37582874-37583873 Glycine max
Glyma.17G222800 1.0kb downstream 1.0kb downstream 10080   true Chr17: 37572794-37582873 Glycine max
Glyma.17G222800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 37572794-37573793 Glycine max
Glyma.17G222800 2.0kb upstream 2.0kb upstream 11080   true Chr17: 37573794-37584873 Glycine max
Glyma.17G222800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 37582874-37584873 Glycine max
Glyma.17G222800 2.0kb downstream 2.0kb downstream 11080   true Chr17: 37571794-37582873 Glycine max
Glyma.17G222800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 37571794-37573793 Glycine max
Glyma.17G222800 5.0kb upstream 5.0kb upstream 14080   true Chr17: 37573794-37587873 Glycine max
Glyma.17G222800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37582874-37587873 Glycine max
Glyma.17G222800 5.0kb downstream 5.0kb downstream 14080   true Chr17: 37568794-37582873 Glycine max
Glyma.17G222800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 37568794-37573793 Glycine max
Glyma.17G222800 10.0kb upstream 10.0kb upstream 19080   true Chr17: 37573794-37592873 Glycine max
Glyma.17G222800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37582874-37592873 Glycine max
Glyma.17G222800 10.0kb downstream 10.0kb downstream 19080   true Chr17: 37563794-37582873 Glycine max
Glyma.17G222800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 37563794-37573793 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304938 5265 Fabidae View MSA
124062114 5270 Rosid View MSA
123739343 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.18478 0.0 33.4496    
cufflinks 9.55166 0.0 41.6552    
cufflinks 6.78413 0.0 28.5613   Low
cufflinks 8.22905 0.0 43.4588    
cufflinks 11.9957 0.0 50.3121   High
cufflinks 6.97677 0.0 26.1193   Low
cufflinks 8.99418 0.0 40.1475    
cufflinks 7.13992 0.0 32.8443    
cufflinks 11.231 0.0 47.8299   High
cufflinks 0.244        
cufflinks 0.133       Low
cufflinks 0.427        
cufflinks 0.692       High
cufflinks 0.822       High
cufflinks 0.212        
cufflinks 0.255        
cufflinks 0.204        
cufflinks 0.373        
cufflinks 0.481       High
cufflinks 0.199        
cufflinks 0.151       Low
cufflinks 0.216        
cufflinks 0.337        
cufflinks 0.147       Low
cufflinks 0.227        
cufflinks 0.22        

0 Strain