Gene : Glyma.17G223000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32370:SF7 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 Genomic Order:  2230
Name:  ? Glyma.17G223000 Secondary Identifier:  ? PAC:30481070
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G223000 0.5kb upstream 0.5kb upstream 5761   true Chr17: 37593199-37598959 Glycine max
Glyma.17G223000 0.5kb upstream 0.5kb upstream 500   false Chr17: 37598460-37598959 Glycine max
Glyma.17G223000 0.5kb downstream 0.5kb downstream 5761   true Chr17: 37592699-37598459 Glycine max
Glyma.17G223000 0.5kb downstream 0.5kb downstream 500   false Chr17: 37592699-37593198 Glycine max
Glyma.17G223000 1.0kb upstream 1.0kb upstream 6261   true Chr17: 37593199-37599459 Glycine max
Glyma.17G223000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 37598460-37599459 Glycine max
Glyma.17G223000 1.0kb downstream 1.0kb downstream 6261   true Chr17: 37592199-37598459 Glycine max
Glyma.17G223000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 37592199-37593198 Glycine max
Glyma.17G223000 2.0kb upstream 2.0kb upstream 7261   true Chr17: 37593199-37600459 Glycine max
Glyma.17G223000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 37598460-37600459 Glycine max
Glyma.17G223000 2.0kb downstream 2.0kb downstream 7261   true Chr17: 37591199-37598459 Glycine max
Glyma.17G223000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 37591199-37593198 Glycine max
Glyma.17G223000 5.0kb upstream 5.0kb upstream 10261   true Chr17: 37593199-37603459 Glycine max
Glyma.17G223000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37598460-37603459 Glycine max
Glyma.17G223000 5.0kb downstream 5.0kb downstream 10261   true Chr17: 37588199-37598459 Glycine max
Glyma.17G223000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 37588199-37593198 Glycine max
Glyma.17G223000 10.0kb upstream 10.0kb upstream 15261   true Chr17: 37593199-37608459 Glycine max
Glyma.17G223000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37598460-37608459 Glycine max
Glyma.17G223000 10.0kb downstream 10.0kb downstream 15261   true Chr17: 37583199-37598459 Glycine max
Glyma.17G223000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 37583199-37593198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304578 5265 Fabidae View MSA
124067835 5270 Rosid View MSA
123737870 5271 Pentapetalae View MSA
122787128 5272 Eudicot View MSA
122043387 5273 Angiosperm View MSA
121310115 5274 Embryophyte View MSA
123347692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.56966 0.0 10.2138    
cufflinks 12.0257 0.0 32.0873   High
cufflinks 1.31401 0.0 4.28984    
cufflinks 1.25129 0.0 4.11839    
cufflinks 1.1123 0.0 3.72921    
cufflinks 1.11912 0.0 3.74682    
cufflinks 1.13741 0.0 3.80723    
cufflinks 5.09688 0.0 14.0379   High
cufflinks 2.03121 0.0 6.25384    
cufflinks 2.513        
cufflinks 0.155       Low
cufflinks 2.14        
cufflinks 0.678        
cufflinks 0.314        
cufflinks 0.44        
cufflinks 9.641     High High
cufflinks 0.412        
cufflinks 5.969        
cufflinks 8.623     High  
cufflinks 10.599     High High
cufflinks 0.134       Low
cufflinks 10.024     High High
cufflinks 10.263     High High
cufflinks 0.073       Low
cufflinks 9.754     High High
cufflinks 0.172       Low

0 Strain