Gene : Glyma.17G225800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF502 - F-BOX/LRR-REPEAT PROTEIN 15-RELATED Genomic Order:  2258
Name:  ? Glyma.17G225800 Secondary Identifier:  ? PAC:30481998
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G225800 0.5kb upstream 0.5kb upstream 8346   true Chr17: 38001927-38010272 Glycine max
Glyma.17G225800 0.5kb upstream 0.5kb upstream 500   false Chr17: 38001927-38002426 Glycine max
Glyma.17G225800 0.5kb downstream 0.5kb downstream 8346   true Chr17: 38002427-38010772 Glycine max
Glyma.17G225800 0.5kb downstream 0.5kb downstream 500   false Chr17: 38010273-38010772 Glycine max
Glyma.17G225800 1.0kb upstream 1.0kb upstream 8846   true Chr17: 38001427-38010272 Glycine max
Glyma.17G225800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38001427-38002426 Glycine max
Glyma.17G225800 1.0kb downstream 1.0kb downstream 8846   true Chr17: 38002427-38011272 Glycine max
Glyma.17G225800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38010273-38011272 Glycine max
Glyma.17G225800 2.0kb upstream 2.0kb upstream 9846   true Chr17: 38000427-38010272 Glycine max
Glyma.17G225800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38000427-38002426 Glycine max
Glyma.17G225800 2.0kb downstream 2.0kb downstream 9846   true Chr17: 38002427-38012272 Glycine max
Glyma.17G225800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38010273-38012272 Glycine max
Glyma.17G225800 5.0kb upstream 5.0kb upstream 12846   true Chr17: 37997427-38010272 Glycine max
Glyma.17G225800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37997427-38002426 Glycine max
Glyma.17G225800 5.0kb downstream 5.0kb downstream 12846   true Chr17: 38002427-38015272 Glycine max
Glyma.17G225800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38010273-38015272 Glycine max
Glyma.17G225800 10.0kb upstream 10.0kb upstream 17846   true Chr17: 37992427-38010272 Glycine max
Glyma.17G225800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37992427-38002426 Glycine max
Glyma.17G225800 10.0kb downstream 10.0kb downstream 17846   true Chr17: 38002427-38020272 Glycine max
Glyma.17G225800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38010273-38020272 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309014 5265 Fabidae View MSA
124065203 5270 Rosid View MSA
123738789 5271 Pentapetalae View MSA
122785626 5272 Eudicot View MSA
122046076 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121348124 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8792 0.0 42.8293    
cufflinks 14.0689 0.0 49.9115    
cufflinks 14.6755 0.0 53.4154    
cufflinks 17.4396 0.0 64.9631    
cufflinks 11.0016 0.0 38.2745    
cufflinks 6.6735 0.0 23.7755   Low
cufflinks 28.1595 0.0 114.909 High High
cufflinks 11.5004 0.0 34.5511    
cufflinks 11.7828 0.0 41.608    
cufflinks 2.056       Low
cufflinks 2.877        
cufflinks 3.285        
cufflinks 1.966       Low
cufflinks 2.119       Low
cufflinks 3.319        
cufflinks 3.544        
cufflinks 1.506       Low
cufflinks 3.766        
cufflinks 3.759        
cufflinks 3.964       High
cufflinks 2.875        
cufflinks 3.925       High
cufflinks 2.776        
cufflinks 2.964        
cufflinks 3.703        
cufflinks 2.694        

0 Strain