Gene : Glyma.17G214100 G. max Wm82.a2.v1
Defline:  (1 of 79) 3.1.4.46 - Glycerophosphodiester phosphodiesterase / Glycerophosphoryl diester phosphodiesterase Genomic Order:  2141
Name:  ? Glyma.17G214100 Secondary Identifier:  ? PAC:30481380
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G214100 0.5kb upstream 0.5kb upstream 3399   true Chr17: 35867824-35871222 Glycine max
Glyma.17G214100 0.5kb upstream 0.5kb upstream 500   false Chr17: 35870723-35871222 Glycine max
Glyma.17G214100 0.5kb downstream 0.5kb downstream 3399   true Chr17: 35867324-35870722 Glycine max
Glyma.17G214100 0.5kb downstream 0.5kb downstream 500   false Chr17: 35867324-35867823 Glycine max
Glyma.17G214100 1.0kb upstream 1.0kb upstream 3899   true Chr17: 35867824-35871722 Glycine max
Glyma.17G214100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 35870723-35871722 Glycine max
Glyma.17G214100 1.0kb downstream 1.0kb downstream 3899   true Chr17: 35866824-35870722 Glycine max
Glyma.17G214100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 35866824-35867823 Glycine max
Glyma.17G214100 2.0kb upstream 2.0kb upstream 4899   true Chr17: 35867824-35872722 Glycine max
Glyma.17G214100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 35870723-35872722 Glycine max
Glyma.17G214100 2.0kb downstream 2.0kb downstream 4899   true Chr17: 35865824-35870722 Glycine max
Glyma.17G214100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 35865824-35867823 Glycine max
Glyma.17G214100 5.0kb upstream 5.0kb upstream 7899   true Chr17: 35867824-35875722 Glycine max
Glyma.17G214100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 35870723-35875722 Glycine max
Glyma.17G214100 5.0kb downstream 5.0kb downstream 7899   true Chr17: 35862824-35870722 Glycine max
Glyma.17G214100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 35862824-35867823 Glycine max
Glyma.17G214100 10.0kb upstream 10.0kb upstream 12899   true Chr17: 35867824-35880722 Glycine max
Glyma.17G214100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 35870723-35880722 Glycine max
Glyma.17G214100 10.0kb downstream 10.0kb downstream 12899   true Chr17: 35857824-35870722 Glycine max
Glyma.17G214100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 35857824-35867823 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2743 0.0 65.9761   High
cufflinks 0.198506 0.0 1.36034 Low  
cufflinks 13.2182 0.0 52.1364   High
cufflinks 0.585567 0.0 4.25087    
cufflinks 0.312728 0.0 2.5587    
cufflinks 0.789367 0.0 6.2931    
cufflinks 0.00786439 0.0 0.0590845 Low Low
cufflinks 3.25231 0.0 15.2951    
cufflinks 0.754317 0.0 5.36875    
cufflinks 1.973       High
cufflinks 0.341        
cufflinks 3.154       High
cufflinks 0.382        
cufflinks 0.029     Low Low
cufflinks 0.072       Low
cufflinks 0.301        
cufflinks 4.089       High
cufflinks 0.838        
cufflinks 0.151        
cufflinks 0.076     Low Low
cufflinks 0.193        
cufflinks 0.186        
cufflinks 0.691        
cufflinks 0.129        
cufflinks 0.102        
cufflinks 0.496        

0 Strain